Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0813 ATGCAATCTCTATCAATCGCTTCGTTGTTGTCATACTATCTCTATCAATGTCCGTGTGTCCTTGAATTTGCCATCCCATTAGACATTGCCATCCCAACATATGATGTGTTCCTCAGTGATCGGGATGCACTTCAACCGATTCTTGAGTACAGAAATGAAGAAAGTCGGAATGATGATGCTGCTGCTAATCCAATCTCTTCTGCTATGGATTTTAGCCTATGTGAAAAAATAGAGTATCCCATTGGAAGAGGCGGATTTGGAACTGTTTATCTTGGCCTCAACAACCGACTTGCACATCATAACATTGTAAAGTATTATGGCAGTAAAAGAGAGGAAAGCCAGATATCCATATACATGGAATATGTTCAACCGGGTTCACTAACGAAATATATTGGATCTCGTGGTGCTTTACAAGAATCATTAGTTCGACATTTCGCTGCACAGATTCTCTCAGGATTGGCTTACTTGCACTGTCAAAGAGTAGTTCACAGGGACATTAAACCAGATAATTTACTTGTGGATTCTGACAACAATATAAAGCTTGCTGACTTTGGTTTGGCTAAGCATGTTTTTCAGAAAGCAGCATATAAGAGCTCTGGTGAAGCCTATGCTGCTGATATTTGGAGTTTGGGCTGTGTAGTCATTCAAATGCTTACGGGAACGCGTCCTTGGCCTATTTGCAGCCACCCGGAAGAAGAAGAAGAGAACCAGTCTAAGCAAATGAGAGGGAATGAGGTTGAAGGTTCCATTTTGCAAACGGAACAAAAGACAAAGCCTAAAAGAAGGAATGGGCCATGGGTTTAG 804 0.4142 MQSLSIASLLSYYLYQCPCVLEFAIPLDIAIPTYDVFLSDRDALQPILEYRNEESRNDDAAANPISSAMDFSLCEKIEYPIGRGGFGTVYLGLNNRLAHHNIVKYYGSKREESQISIYMEYVQPGSLTKYIGSRGALQESLVRHFAAQILSGLAYLHCQRVVHRDIKPDNLLVDSDNNIKLADFGLAKHVFQKAAYKSSGEAYAADIWSLGCVVIQMLTGTRPWPICSHPEEEEENQSKQMRGNEVEGSILQTEQKTKPKRRNGPWV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0813 267 SUPERFAMILY Protein kinase-like (PK-like) 79 229 IPR011009 -
Alju04g0813 267 SMART serkin_6 75 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0813 267 Pfam Protein kinase domain 94 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0813 267 Gene3D Transferase(Phosphotransferase) domain 1 74 264 - -
Alju04g0813 267 MobiDBLite consensus disorder prediction 227 241 - -
Alju04g0813 267 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0813 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Alju04g0813 267 MobiDBLite consensus disorder prediction 227 267 - -
Alju04g0813 267 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 96 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0813 Alju-ChrAlju04 9673975 9678654 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0813 81 224 MAP Kinase Kinase Kinase AT5G66850 40.594 1.53e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju04g0813 Pkinase 2.3e-32 CL0016