Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0765 ATGGATGCAACCGTTGCTTTAATGCTCATAGAAGCTGTATTGATTTTCCTGGGCATAGCAATTTTTAAAGCTATCAGATTAATCTCTCCACTTCATGCTATCCACCCTATTTCTGTTGATGATAGCTGTAAAGATGCTGCTGATTCGATTCCCTCAGCTTCTTCTCCTTCTAATCTTGTTGCTGCTCCTCCTACAACCAAGTATGACGTCTTTCTTAGCTTTAGAGGAGAAGACACTCTTGACAGTTTCTCAAGTTATCTCAATGAAGCGCTTTGCGATGCCAACCTTCAAACTTTTATGGATCACAAGCTTCACAAAGAAGAGCATATCTCACCGCATCTTCTTGAAACAATAGAGGAATCAGATATATTTTTGATCATTTTCTCCAAAGATTATGCTTCTTCAACATGGTGTATGGATGAGCTCGTTCATATTATGAGATGCAGGGATCAATACCAAAGGGTTGTGATCCCTATTTTCTATGATGTAGACCCATCAAATGTCCGCAAACAAAATGCAAGTTTTGGAGATGGATTTGATAAGCTTAAGCAGAGATTTAAGCACAACCATGAAAAAGTGCAGGAGTGGACAAATGCTTTGGTCCAATCAACAAATCTCTCTGGATGGGATTCAAAAAATACCAGGCCTGAATCCAAACTCATTAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATAGTAAGTCGTCCTTTCATTTTGAAGGATTAGTTGGGATTGATCATCAGATTCGGGAAATTGAAGACCTACTGAGTGAAGCTCACATTGTGGGAATATGGGGTATGGGTGGTATAGGTAAGACTACTCTTGCCAAAGCTGTATTTCACAAGTTGAAAGCACAATTTGAAGCTTTCTCGTTTGTTGAAAATGTAAGAGAACAACTAGCAATAATTGGATTTGATAGGTTACAGCAAGAATGTCTCAAAGAATTATTAAAAGATGAGGACATTAATGTCTTTGACATAAAATCCATTTTTGTGAGAAGTAGGCTTGGTCGCAAAAGAATCCTTCTAATACTTGATGATGTGGATAATTCAATACCAGCTGAAGATTTAACTGAAGTGTATCATTGGTTTGGAGAAGGAAGTAGAATTATTATTACATCAAGAGACATGCAAGTACTTCATAATGCTTCTGCATTTTCAACATACTCTATTCCAATATTGGATTTTCATGATGCCCTTCGTGTCTTTAGTTTGAAAGCATTCAAGAAAAATGAGCCATTAAAGGATTTTGTGGAGTTATCAAAATCTATAGTGGATTATTGTCAAGGAAATCCATTGGCCCTTATAATGTTGGGTTCTTTTCTTCAGGGAAGAGGAAATGAAGAGTGGGAAAGTTATTTGGAAAAAATAAAAGAAGCTCCACCCAAGTACATTGTTGATGTTTTGAAATTGAGTTTTGATGGGCTTGATGAGCACCAAAAGAATATTTTTCTTGACATAGCTTTTTTCATCAAGGAAGGAGTTGAAGTTTCTTTCAACTTAATAAGACAATTATATGGCTCTTCTAGTGATATTGACATAAGTGTTCTTAAAGATAGATCCCTCACTTCATTTGATCACAATGGCTATATTGAGATGCATGATCTTGTGAGGGACATGGGTGTTGAAATTGCTAGAGAACAGTCATTCTCTAATCCTAAAGGGCCTGTTCGATTGCGAAGTCATCGGGACATTTATGATTTTTTCATTAGTAATGAGGTAATAATTTATTCGTTCTATGGTTATTTTATCTCATGTTCTATGGTATTCTGGTAA 1779 0.3603 MDATVALMLIEAVLIFLGIAIFKAIRLISPLHAIHPISVDDSCKDAADSIPSASSPSNLVAAPPTTKYDVFLSFRGEDTLDSFSSYLNEALCDANLQTFMDHKLHKEEHISPHLLETIEESDIFLIIFSKDYASSTWCMDELVHIMRCRDQYQRVVIPIFYDVDPSNVRKQNASFGDGFDKLKQRFKHNHEKVQEWTNALVQSTNLSGWDSKNTRPESKLIKKIVKDILSKLNSKSSFHFEGLVGIDHQIREIEDLLSEAHIVGIWGMGGIGKTTLAKAVFHKLKAQFEAFSFVENVREQLAIIGFDRLQQECLKELLKDEDINVFDIKSIFVRSRLGRKRILLILDDVDNSIPAEDLTEVYHWFGEGSRIIITSRDMQVLHNASAFSTYSIPILDFHDALRVFSLKAFKKNEPLKDFVELSKSIVDYCQGNPLALIMLGSFLQGRGNEEWESYLEKIKEAPPKYIVDVLKLSFDGLDEHQKNIFLDIAFFIKEGVEVSFNLIRQLYGSSSDIDISVLKDRSLTSFDHNGYIEMHDLVRDMGVEIAREQSFSNPKGPVRLRSHRDIYDFFISNEVIIYSFYGYFISCSMVFW 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0765 592 ProSiteProfiles TIR domain profile. 66 232 IPR000157 GO:0007165
Alju04g0765 592 Pfam TIR domain 67 244 IPR000157 GO:0007165
Alju04g0765 592 SUPERFAMILY Toll/Interleukin receptor TIR domain 64 209 IPR035897 -
Alju04g0765 592 SMART till_3 67 206 IPR000157 GO:0007165
Alju04g0765 592 Gene3D - 65 239 IPR035897 -
Alju04g0765 592 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 234 - -
Alju04g0765 592 Gene3D - 240 389 IPR027417 -
Alju04g0765 592 Pfam NB-ARC domain 253 462 IPR002182 GO:0043531
Alju04g0765 592 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 68 569 IPR044974 GO:0006952
Alju04g0765 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 488 IPR027417 -
Alju04g0765 592 PRINTS Disease resistance protein signature 262 277 - -
Alju04g0765 592 PRINTS Disease resistance protein signature 429 443 - -
Alju04g0765 592 PRINTS Disease resistance protein signature 336 350 - -
Alju04g0765 592 SUPERFAMILY "Winged helix" DNA-binding domain 466 566 IPR036390 -
Alju04g0765 592 Gene3D - 395 478 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0765 Alju-ChrAlju04 8608629 8610569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0765 68 585 WRKY Transcription Factor Family AT4G12020 28.381 5.69e-55 200