Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0746 ATGAATAAAGTGCTTGGCCTAATTGATCTGATTTTTCTGTTGCCGACCGGTGTAGAAGCGGGTCGATCCAACCCAACTAGCTCTATCAAACCGGAGTTATCGAGCTTTGGCCTTTGTGGTAGACACCAACGGACCACCCCGAGCGGCACGTGTAGCTTCTCTCGACGAGGAACACACATGGCGAAGGAAGCTACGCGGTCGCGAAAGAGGTCTCTCTCATCACCCACTGCTTCTGCTTCTCATGAACACTCTACAAGAACTTCTTCTGACGGCAGGATAGTGTTGAGGGTAAAATTAAATGAGGGGATGAAGAGATCTTCCCAGCTGACTAAGTCGGGGAAGAAATCCAAAGCAAAGCAAAAGAAGAATAACAAAAAACTTGATGCTAAGAAACCAAAGAAACCCCCAACTGCTTTCTTCTACTTCTTGGAAGATTTCCGTAAAGAATTTCAAGAGCGGAATCCAGATGTCAAGTCAATGCGTGATATCGGCAAGGCTTGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTACGATATAGCCACAGAGAAACGAGCAGAATTTGATAGAGCAATGATCGAATATAACAAGAAAATGGAAAGTGGAGAGTACGAAGAAACTGATGGAGAATCAGAGTTTGATGATGTGTAA 666 0.4429 MNKVLGLIDLIFLLPTGVEAGRSNPTSSIKPELSSFGLCGRHQRTTPSGTCSFSRRGTHMAKEATRSRKRSLSSPTASASHEHSTRTSSDGRIVLRVKLNEGMKRSSQLTKSGKKSKAKQKKNNKKLDAKKPKKPPTAFFYFLEDFRKEFQERNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMIEYNKKMESGEYEETDGESEFDDV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0746 221 MobiDBLite consensus disorder prediction 40 133 - -
Alju04g0746 221 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 132 201 IPR009071 -
Alju04g0746 221 CDD HMG-box_AtHMGB1-like 137 193 - -
Alju04g0746 221 SUPERFAMILY HMG-box 119 210 IPR036910 -
Alju04g0746 221 Gene3D High mobility group box domain 125 215 IPR036910 -
Alju04g0746 221 MobiDBLite consensus disorder prediction 40 55 - -
Alju04g0746 221 SMART hmgende2 131 202 IPR009071 -
Alju04g0746 221 Pfam HMG (high mobility group) box 132 201 IPR009071 -
Alju04g0746 221 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 105 216 IPR031061 -
Alju04g0746 221 MobiDBLite consensus disorder prediction 110 129 - -
Alju04g0746 221 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0746 Alju-ChrAlju04 7999613 8006535 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Alju04g0746 HMG_box 3.9e-17 CL0114