Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0743 ATGCATGCGCTTCAATCTCCAACTCTTTTAGTTTGTCCATTGGACACACTTCGCAAATCGTCCAATGGCACTGCAGGAAGATCCAACAAGGTGTCCTACATCTTGGCCACTGTATCCCCCATTGTTTCTGCCCCAAAGAGAGAGAAGGACCCGAAGAAGCGGATTGTGATCACCGGAATGGGCCTTGCCTCTGTGTTTGGCAACGACGTCGATACTTACTATGACATGCTTCTTGCCGGTGAGAGTGGGATTGGCCCAATCGATCGATTCGATGCCTCCAAGTTTCCCACCAGGTTTGCTGGGCAGATCCGAGGCTTCAGCTCCGAAGGGTACATTGATGGCAAGAATGATAGGCGTCTTGATGATTGCCTTCGCTACTGCATTGTTGCAGGCAAGAAGGCTCTCGAGGTTGCCGACCTTAGCCTTTCTAAGATTGACAAGGAACGGGCTGGTGTGCTTGTCGGATCAGGAATAGGCGGTCTTGGAGTCATTTCTAATGGTGTTCAGGATCTTATGGAGAAAGGATGCCGCAAAGTAACACCTTTTGCAATTCCTTATTCAATCACTAATACGGGTTCAGCTTTGCTTGCAATTGATCTTGGATTCATGGGCCCAAATTACTCTATTTCAACTGCTTGTGCTACCTCCAATTATTGCTTTTATGCAGCTGCTAATCACATACGTAGGGGAGAGGCTGATCTGATGATAGCAGGTGGGACTGAAGCTGCCATTATTCCCATTGGGTTAGGGGGTCTTGTTGCATGCAGGGCTCTGTCCCAGAGAAATGATGACCCAAAAACTGCTTCAAGGCCCTGGGACAAAGAACGAGATGGCTTTGTAATGGGTGAAGGTGCTGGAATATTGCTAATGGAGAGTCTGGAACACGCAATGAAGCGAGGGGCACCTATTATTGCTGAATACTTGGGAGGTGCTGTTAATCGTGATGCTTATCATATGATTAACCCTAGAGCTGATGGACTTGGTTTATCTTCATGTATCCGGAATAGCCTTGAAGATGCTGGTGTTTCTCCTGAGGAGGTCAACTACATAAATGCTCATGCAACTTCTACTCTTGCTGGTGACTTGGCAGAGATTAATGCAATAAAAAATGTTTTCAAGAACACATCAGAGATCAAAATTAATGCCACCAAGGTATTATCCCACTCTTTAGATCGTGTTTCAGATTATAGCAGTCGGAGGCAAGCAGAAGGTGAAGAAATGGATATTAGCGAAGAAGTCAGGGCGGCTCACAAACGAGAATTCGCCGATTTCCTGGATCAGGATGTTGGGAAAGGGATTTACATGGACGAGATCAAAGCAATGATCAACCACAAGCGTCGTCGCCTCATCGTCAATATCTCTGATCTTCATAGCTTTCGAGATTTGGGTAATAGGATTCTCAGGAACCCTAGTGAGTACATACAATCATTCTGTGATGCCGTAACGGATGCTGCACGTGCTATTGACCCCAAGTATTTGAAGGAAGGAGAGCAAGTGCTTGTAGGGTTTGAAGGCCCCTTTGTTTCCCGTCGTGTCACCCCAAGGGAGCTTATGTCTGCATTCATAGGTTCTATGGTTTGCGTTGAGGGCATTGTCACTAAATGTTCGCTTGTTAGGCCAAAGGTGGTTAAAAGTGTTCACTTCTGCCCCACGACGAAAAAATTCACCTCTCGCGAATATCGTGATATTACTTCCAATATGGGTTTGCCCACTGGCTCTGTTTATCCCACAAGGGATGAAAGTGGCAACTTACTGGTGACTGAGTATGGATTGTGCAAATATAAAGATCATCAAACCTTATCCATGCAAGAAGTTCCTGAGAATTCTGCACCTGGTCAGCTTCCAAGAACAGTAGATATTATAGTAGAGGATGACCTTGTTGACTCTTGCAAACCTGGGGATCGTGTGGCTATTGTGGGGATATACAAGGCCCTTGCAGGAAAAAGTAAAGGCAGTGTGAATGGAGTATTCAGGACTGTGCTCATAGGCAACAATGTCTCTCTTCTTAACAAAGAGGCTAATGCACCAATCTACAGTGCTGAAGATCTAAAAAACATAAAGAAGATTGCCGAGAGAGATGATGCATTTGACCTTCTCGGTAATTCACTTGCACCTTCTATTTATGGGCATTCCTGGATAAAGAAAGCCGTGATTTTGTTGATGCTTGGGGGAGTTGAAAAGAACTTAAAGAATGGTACCCATTTGCGAGGTGACATTAACATGATGATGGTTGGAGATCCGTCTGTTGCCAAGTCTCAACTCTTAAGAGCAATTATGAATATTGCTCCCTTGGCCATATCTACTACAGGTCGGGGTTCCTCTGGGGTTGGTTTAACAGCAGCAGTTACTTCCGATCAAGAAACAGGGGAAAGAAGGCTAGAAGCTGGAGCAATGGTTCTGGCTGATCGAGGTGTTGTCTGCATTGATGAGTTTGACAAAATGAATGATCAAGATCGGGTTGCTATACATGAAGTTATGGAACAACAAACTGTAACTATAGCCAAAGCTGGTATCCACGCATCTCTTAATGCTCGATGCAGTGTGGTGGCTGCTGCAAATCCCATATATGGAACTTATGACCGATCATTGACTCCAACGAAAAATATTGGACTCCCAGACTCCTTGCTTTCCCGATTTGATCTTCTGTTTATTGTCTTGGATCAAATGGATCCTGATATTGATCGCCATATCTCAGAGCATGTCTTGCGTATGCATAGATACCGTTCTGCTATTAATGGAGGTGAGGCTGCATTTGATGGTGCCCCAAGATATGGAAGAGAAGATGATGCTGATGCCAACTCAGCTGTCTTTGTCAAATATAACCGGATGCTACATGGAAAGAAAACAGATAAAAGCCGAAAGCGAGATGTGCTCACTATCAACTTTCTTAAAAAGTATATTCATTATGCTAAACATAGGATTCAACCTGAACTTACTGATGAGGCATCTGACCACATTGCTACAGCTTATGCAGAGCTCAGAAATTCTGGTTCAAATGCTACGACTGGAGGAACTCTACCTATCACAGCTAGAACTTTGGAAACCATTATACGTCTCTCAACGGCTCATGCCAAATTGAAGTTGAGCAGACAGGTTTTAAAGTCTGATGTTGAAGCTGCCCTGAAAGTTCTTAACTTTGCAATATATCACAAAGAACTAACCGAAATGGAGGAGCGTGAGCAAGAAAGGGAGAGAGAAATGGAGAGGAAACGCAGGGCTGAGGAGCATCCTGGTGAAAATGAGGAACCTAGTCGACGTCCTAAAAATAGAAGAGCCTCCACGGCTGAAGCCATGGAAGTTGATCAGACTTCGGCAGCCCAATCTACTACCGATCTCACACCTGAAAGAATCGAAGCATTCAATTCTTTGTTTGGTCAGCATATGCGTGCCAATCGCTTGGATCTCATAACCATTTCAGATATAGAGAATGTTGTCAACCAAGGGGCAGAATCCAGTTACAGCAGAGAAGATATATTAGTCCTGTTGGAGAAGCTGCAAGATGACAATAGAGTGATGATAGCTGATGGAGTGAGGTTGAAGGGAGCAGAATCTCACCCTCCAGAGTTAAATCAACTACTTGCTGGGAGATCCTTGGGCAAAGTTGACATAACAGAATTCTCCTGTCAGAGGAACGTTAATGTCTCCCTAAGTTTTATTGTTGTCTATACTGTAATGCCAACCATATCATGTATTTCAGTGATAACAGATTTTCACGTTAGATTATTGGGAAATTTGTTCACTAAATACAATGAACTTCTATAA 3762 0.4407 MHALQSPTLLVCPLDTLRKSSNGTAGRSNKVSYILATVSPIVSAPKREKDPKKRIVITGMGLASVFGNDVDTYYDMLLAGESGIGPIDRFDASKFPTRFAGQIRGFSSEGYIDGKNDRRLDDCLRYCIVAGKKALEVADLSLSKIDKERAGVLVGSGIGGLGVISNGVQDLMEKGCRKVTPFAIPYSITNTGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMIAGGTEAAIIPIGLGGLVACRALSQRNDDPKTASRPWDKERDGFVMGEGAGILLMESLEHAMKRGAPIIAEYLGGAVNRDAYHMINPRADGLGLSSCIRNSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKNVFKNTSEIKINATKVLSHSLDRVSDYSSRRQAEGEEMDISEEVRAAHKREFADFLDQDVGKGIYMDEIKAMINHKRRRLIVNISDLHSFRDLGNRILRNPSEYIQSFCDAVTDAARAIDPKYLKEGEQVLVGFEGPFVSRRVTPRELMSAFIGSMVCVEGIVTKCSLVRPKVVKSVHFCPTTKKFTSREYRDITSNMGLPTGSVYPTRDESGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDIIVEDDLVDSCKPGDRVAIVGIYKALAGKSKGSVNGVFRTVLIGNNVSLLNKEANAPIYSAEDLKNIKKIAERDDAFDLLGNSLAPSIYGHSWIKKAVILLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPDIDRHISEHVLRMHRYRSAINGGEAAFDGAPRYGREDDADANSAVFVKYNRMLHGKKTDKSRKRDVLTINFLKKYIHYAKHRIQPELTDEASDHIATAYAELRNSGSNATTGGTLPITARTLETIIRLSTAHAKLKLSRQVLKSDVEAALKVLNFAIYHKELTEMEEREQEREREMERKRRAEEHPGENEEPSRRPKNRRASTAEAMEVDQTSAAQSTTDLTPERIEAFNSLFGQHMRANRLDLITISDIENVVNQGAESSYSREDILVLLEKLQDDNRVMIADGVRLKGAESHPPELNQLLAGRSLGKVDITEFSCQRNVNVSLSFIVVYTVMPTISCISVITDFHVRLLGNLFTKYNELL 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0743 1253 ProSitePatterns Ketosynthase family 3 (KS3) active site signature. 204 220 IPR018201 GO:0004315|GO:0006633
Alju04g0743 1253 Gene3D - 541 595 - -
Alju04g0743 1253 MobiDBLite consensus disorder prediction 1056 1112 - -
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein family signature 736 751 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein family signature 848 860 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein family signature 824 837 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein family signature 796 810 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein family signature 875 883 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 Gene3D - 515 645 IPR012340 -
Alju04g0743 1253 SMART mcm 510 1049 IPR031327 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 ProSiteProfiles Ketosynthase family 3 (KS3) domain profile. 52 490 IPR020841 -
Alju04g0743 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 705 1062 IPR027417 -
Alju04g0743 1253 Gene3D - 46 306 IPR016039 GO:0016746
Alju04g0743 1253 ProSiteProfiles MCM family domain profile. 695 901 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 Pfam MCM OB domain 515 644 IPR033762 -
Alju04g0743 1253 MobiDBLite consensus disorder prediction 1096 1112 - -
Alju04g0743 1253 Pfam Beta-ketoacyl synthase, C-terminal domain 305 384 IPR014031 -
Alju04g0743 1253 SUPERFAMILY Nucleic acid-binding proteins 419 663 IPR012340 -
Alju04g0743 1253 ProSitePatterns MCM family signature. 804 812 IPR018525 GO:0003677|GO:0005524|GO:0006260
Alju04g0743 1253 Pfam MCM AAA-lid domain 961 1045 IPR041562 -
Alju04g0743 1253 FunFam DNA helicase 541 595 - -
Alju04g0743 1253 Gene3D - 677 1070 IPR027417 -
Alju04g0743 1253 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 409 1096 IPR031327 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 Gene3D - 307 393 IPR016039 GO:0016746
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 897 907 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 587 601 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 864 874 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 1036 1051 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Alju04g0743 1253 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 613 625 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Alju04g0743 1253 CDD KAS_I_II 53 390 IPR000794 -
Alju04g0743 1253 SUPERFAMILY Thiolase-like 53 301 IPR016039 GO:0016746
Alju04g0743 1253 SMART AAA_5 737 890 IPR003593 GO:0016887
Alju04g0743 1253 FunFam DNA helicase 411 510 - -
Alju04g0743 1253 MobiDBLite consensus disorder prediction 1056 1095 - -
Alju04g0743 1253 Gene3D - 408 505 - -
Alju04g0743 1253 FunFam 3-oxoacyl-[acyl-carrier-protein] synthase 2 27 395 - -
Alju04g0743 1253 Coils Coil 1050 1076 - -
Alju04g0743 1253 SMART Beta-ketoacyl synthase 55 469 IPR020841 -
Alju04g0743 1253 SUPERFAMILY Thiolase-like 263 384 IPR016039 GO:0016746
Alju04g0743 1253 Pfam MCM P-loop domain 683 905 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju04g0743 1253 Pfam MCM N-terminal domain 418 489 IPR027925 -
Alju04g0743 1253 CDD MCM3 698 1047 - -
Alju04g0743 1253 Pfam Beta-ketoacyl synthase, N-terminal domain 53 296 IPR014030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0743 Alju-ChrAlju04 7957393 7971448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0743 407 981 Core DNA Replication Machinery Family AT5G46280 80.903 0.0 964