Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0742 ATGGTTTCCCGAAATCAACCCAAAGAAGACAACCCTAAGAAGCAATGGTCCTTGAGAGACTTCGAGATCGGAAAACCTCTTGGAAAGGGAAAATTCGGTAGAGTCTACGTCGCTCGAGAAGTGAAGAGCAAATATATTGTGGCGCTTAAGATTATCTTTAAGGAACAAATAGAAAAGTACAGAATTCATCATCAACTGAGGAGAGAGATGGAGATTCAGACTAGTCTTCAGCACCCCAACATTCTGCGTCTCTACGGTTGGTTTCATGATGCTGAACGGGTTTTCTTGATACTTGAGTATGCTCATAATGGAGAACTTTACAAGGAGCTTAGAAAAAAAGGTCATCTCAGTGAGAAGCAAGCAGCCACGTATATTTTGAGCCTCACAAAGGCGTTGGCATATTGTCATGAGAAGAATGTCATTCATAGGGATATAAAGCCCGAGAATTTGTTACTTGACCATGAGGGTCGCCTTAAAATTGCAGACTTTGGTTGGTCTGTACAGTCAAGAAGTAAGAGACATACCATGTGTGGAACACTTGATTATCTAGCACCAGAAATGGTAGAAAACAAAGAACATGATTTTTCTGTTGATAACTGGACTTTGGGCATACTTTGTTATGAATTCCTCTACGGTTCTCCCCCATTTGAGGCCGAGAGTCAAGTTGACACTTTCAAGAGGATAATGAAGATTGACCTAAATTTCCCCTCTACTCCTACTGTTTCTTCAGAAGCCAAAAATTTGATTAGCCGGCTCTTGGTGAAAGATTCCACAAGAAGACTATCACTTCAAAAGATTATGGAGCATCCTTGGATACTCAAGAATGCTGATCCTATGGGTATCTGCAATAAATAG 855 0.407 MVSRNQPKEDNPKKQWSLRDFEIGKPLGKGKFGRVYVAREVKSKYIVALKIIFKEQIEKYRIHHQLRREMEIQTSLQHPNILRLYGWFHDAERVFLILEYAHNGELYKELRKKGHLSEKQAATYILSLTKALAYCHEKNVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDFSVDNWTLGILCYEFLYGSPPFEAESQVDTFKRIMKIDLNFPSTPTVSSEAKNLISRLLVKDSTRRLSLQKIMEHPWILKNADPMGICNK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0742 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Alju04g0742 284 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0742 284 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0742 284 SUPERFAMILY Protein kinase-like (PK-like) 13 276 IPR011009 -
Alju04g0742 284 CDD STKc_Aurora 20 273 - -
Alju04g0742 284 FunFam Aurora kinase A 13 104 - -
Alju04g0742 284 Gene3D Transferase(Phosphotransferase) domain 1 105 280 - -
Alju04g0742 284 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Alju04g0742 284 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0742 284 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Alju04g0742 284 PIRSF ILK 1 273 - -
Alju04g0742 284 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 7 282 IPR030616 GO:0004672
Alju04g0742 284 FunFam Serine/threonine-protein kinase ark1 13 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0742 Alju-ChrAlju04 7952908 7955468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0742 21 278 CBL-interacting serine-threonine protein kinases AT5G10930 40.377 2.38e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Alju04g0742 Pkinase 1.2e-76 CL0016