Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0737 ATGGCTTCACACTTCCCCAGTTTGCTCTTTTGTCTTCAAAGTCGCCATCCTTTTCCTCATCATCAGCCTAACGGTGGTGGACGCTCTGCGCTGGCAAGCTTGGTGTGTGGGGGAGTGAAAAAGGAGAGAGCTGCGTTCAAAGGAGAGAAGAAAAGAGTGAGAGAGGGAGACAGGCGTCAGAGTCCTTCCTGTGTTCATCTTCTATCGGAAATGGTTGCGTTCAGGTTCCACCAGTACCAGGTCGTTGGGAGAGCTCTGCCCACGGAAGCCGATGAACACCCAAAGATTTACCGAATGAAACTCTGGGCTACGAACGAAGTTCGCGCCAAGTCGAAGTTTTGGTATTTTTTGAGGAAACTGAAGAAGGTTAAGAAAAGCAATGGTCAAGTGCTTGCTATCAATGAGATTTTTGAGAAGAACCCAACAAAGATCAAGAACTATGGCATTTGGCTGCGTTATCAGAGTAGGACTGGGTATCACAACATGTACAAAGAGTACCGTGATACCACTCTAAACGGTGCTGTTGAGCAGATGTACAATGAGATGGCCTCCCGTCACAGGGTCCGATTCCCTTGCATTCAGATCATCAAGACGGCCACCATCCCAGCCAAGCTTTGCAAGAGGGAGAGCAGCAAGCAATTCCACAACTCAAAGATCAAGTTCCCATTGGTTTACAGGAAAGTCAGGCCACCCACCAGGAAGCTGAAAACAACATTCAAAGCCAAAAAGCCTAACTTGTTTATGTAA 747 0.4752 MASHFPSLLFCLQSRHPFPHHQPNGGGRSALASLVCGGVKKERAAFKGEKKRVREGDRRQSPSCVHLLSEMVAFRFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVYRKVRPPTRKLKTTFKAKKPNLFM 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0737 248 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 77 198 IPR023573 GO:0003735|GO:0005840|GO:0006412
Alju04g0737 248 Gene3D - 141 213 - -
Alju04g0737 248 PANTHER 60S RIBOSOMAL PROTEIN L18A 73 247 IPR028877 -
Alju04g0737 248 Hamap 50S ribosomal protein L18Ae [rpl18a]. 76 139 IPR028877 -
Alju04g0737 248 Gene3D - 65 140 - -
Alju04g0737 248 FunFam 60S ribosomal protein L18a 71 141 - -
Alju04g0737 248 SUPERFAMILY RplX-like 141 216 - -
Alju04g0737 248 FunFam 60S ribosomal protein L18a 142 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0737 Alju-ChrAlju04 7919792 7923290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0737 70 248 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.061 7.57e-123 346