Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0734 ATGCGAGGGTTTTCGAGTCGTCGGAGCACTCAAACACAGAAGCCGCAAGCTCGACCCTTGTGTTCTACCTCGGTGCCCACAATCATGTCAAGGAGTAGAAAGACTAGAGAGCCAAAGGAAGAAACTGTTACTCTTGGCCCAACTGTCAGAGAGGGCGAACATGTCTTCGGAGTGGCCCATATCTATGCATCATTTAATGATACATTCATTCACGTGACTGATTTGTCTGGAAGGGAAACCCTTGTTCGCATAACAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCCCCCTATGCTGCTATGCTTGCAGCACAGGATGTATCTGCTAGATGCAAGGAGCTGGGCATAACTGCTCTTCATATTAAGCTTCGTGCCACTGGTGGAAACAAGACGAAAACACCAGGTCCTGGTGCTCAGTCTGCTCTCCGTGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGGATAGAGGATGTGACTCCAATCCCATCAGACAGCACCAGGAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAA 540 0.4907 MRGFSSRRSTQTQKPQARPLCSTSVPTIMSRSRKTREPKEETVTLGPTVREGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0734 179 ProSitePatterns Ribosomal protein S11 signature. 144 166 IPR018102 -
Alju04g0734 179 MobiDBLite consensus disorder prediction 1 31 - -
Alju04g0734 179 SUPERFAMILY Translational machinery components 52 177 - -
Alju04g0734 179 Hamap 30S ribosomal protein S11 [rpsK]. 31 176 IPR001971 GO:0003735|GO:0005840|GO:0006412
Alju04g0734 179 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 32 174 IPR001971 GO:0003735|GO:0005840|GO:0006412
Alju04g0734 179 FunFam 40S ribosomal protein S14 29 179 - -
Alju04g0734 179 MobiDBLite consensus disorder prediction 159 179 - -
Alju04g0734 179 Gene3D Ribosomal protein S11 29 179 IPR036967 GO:0003735|GO:0005840|GO:0006412
Alju04g0734 179 MobiDBLite consensus disorder prediction 1 39 - -
Alju04g0734 179 Pfam Ribosomal protein S11 57 175 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0734 Alju-ChrAlju04 7901760 7905370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0734 33 168 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 91.912 1.10e-91 262