Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0714 ATGGCCGACGAATCCAATACCACCTGCTGGTCTTTCCTGGACTTTCGACAGTTTCATGGTGCCAAGTTTAATGAGAACAAGTTGTTGGAGAACGGCGAGAGGGGAGATATGCCGGTCAATAACGGAAATTCGTCCGGCGTTATGTCTAATGGCAACAATCATACCAAAAGGACTAGGGAGACGACTATCTTTGAACAGTTTCAAAGCCAGGTGTTTGATGCTGTGATACAACACATTTTCTGTGTACTTCTCATTGACGTCTTTGAATATTACTGTATGCAAAAGCCCTTACTTCCACCTTTTGAATCAGCTGATATGCGTGCTTTAGGAGAGAGTTTATGCAGGGATATTATTCGTGGGAGCCCGGATGTTAAGTGGGAAAGCATCAAGGGATTAGAGAATGCCAAACGTTTACTGAAGGAGGCTGTTGTGATGCCAATTAAGTACCCCAAGTACTTCACTGGTTTACTATCACCGTGGAAAGGGATTCTTTTGTTTGGCCCTCCTGGGACTGGAAAGACAATGCTTGCAAAGGCAGTTGCAACAGAGTGCAAGACTACATTTTTCAATATTTCTGCATCATCTGTTGTCAGCAAATGGCGAGGTGATTCAGAGAAGTTGGTGAGGGTGTTGTTTGAGTTAGCTCGGCACCATGCACCCTCAACAATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGTGGTGAAGCACGCAGTGAGCATGAAGCAAGTAGACGACTTAAAACTGAGCTACTCATACAGATGGACGGTTTGACAAAAACCAATGAACTTGTTTTTGTTTTGGCGGCAACAAATCTTCCATGGGAATTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGTATCCTCGTACCACTTCCAGAATCAGAAGCAAGAAGAGCAATGGTTGAGGAACTCCTTCCAGCACATGATGGTGGGGAGCAGATCCCCTATGATTTCTTGGTGGAGCAAACAGAAGGATTTTCAGGCTCAGATATTCGTTTACTGTGTAAAGAGGCAGCAATGCAGCCCTTGAGACGCCTGATGTCACAACTTGAACAGAGACAGGAGGTGGTGCCTGAAGAAGAGTTGCCAAAGGTGGGGCCAATCAGAAGGGAAGATATAATGGTAGCTTTGAATAATACACGACCATCTGCTCATCTGCAGGCTCCCAAATATGAGAAGTTCAATAATGATTACGGTAGTCAAATTCTTCATTGA 1224 0.4444 MADESNTTCWSFLDFRQFHGAKFNENKLLENGERGDMPVNNGNSSGVMSNGNNHTKRTRETTIFEQFQSQVFDAVIQHIFCVLLIDVFEYYCMQKPLLPPFESADMRALGESLCRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPESEARRAMVEELLPAHDGGEQIPYDFLVEQTEGFSGSDIRLLCKEAAMQPLRRLMSQLEQRQEVVPEEELPKVGPIRREDIMVALNNTRPSAHLQAPKYEKFNNDYGSQILH 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0714 407 MobiDBLite consensus disorder prediction 37 53 - -
Alju04g0714 407 FunFam Katanin p60 ATPase-containing subunit A-like 2 295 383 - -
Alju04g0714 407 FunFam Katanin p60 ATPase-containing subunit A-like 2 122 307 - -
Alju04g0714 407 Pfam AAA+ lid domain 322 356 IPR041569 -
Alju04g0714 407 CDD RecA-like_VPS4-like 129 292 - -
Alju04g0714 407 SMART AAA_5 159 296 IPR003593 GO:0016887
Alju04g0714 407 Gene3D - 122 398 IPR027417 -
Alju04g0714 407 PANTHER AAA DOMAIN-CONTAINING 39 403 - -
Alju04g0714 407 MobiDBLite consensus disorder prediction 30 53 - -
Alju04g0714 407 Pfam ATPase family associated with various cellular activities (AAA) 163 293 IPR003959 GO:0005524|GO:0016887
Alju04g0714 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 389 IPR027417 -
Alju04g0714 407 Gene3D - 295 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0714 Alju-ChrAlju04 7568093 7574108 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0714 157 366 Calmodulin-binding Proteins AT3G56690 36.620 7.85e-32 126