Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0710 ATGGCCGACGAATCCAATACCACCTGCTGGTCTTTCCTGGACTTTCGACAGTTTTATGGTGCCAAGTATAATGAGAAGAAATTGTTGGAGAATGGCGAGAGGGGAGATATGCCTGCCAATAACGGAAATTCGTCCGGCGTTATGTCTAATGGCAACAATCATGCCAAAAGGCCTAGGGAGACGACTATCTTTGAACAGTTTCAAAGCCAGGGGCAGAATTCATCTCTTTCGAATGGATTTTCATCAAATCATCTGGATGAAAGGCCGCAAAAGCCCTTACTTCCACCTTTTGAATCAGCTGATATGCGTGCTTTAGGAGAGAGTTTATGCAGGGATATTATTCGTGGAAGCCCGAATGTTAAGTGGGAAAGTATCAAGGGTTTAGAGAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATTAAGTACCCCAAGTATTTCACTGGTTTACTATCACCGTGGAAAGGGATTCTTTTGTTTGGCCCTCCTGGGACTGGAAAGGTTTGTGATTCAGAGAAGTTGGTGAGGGTGTTGTTTGAGTTAGCTCGGCACCATGCACCCTCAACAATATTTCTTGATGAGATTGATGCAATCATTAGTCAACGTGGTGAAGCACGCAGTGAGCATGAAGCAAGTAGACGGCTTAAGACTGAGCTACTCATACAGATGGACGGTTTGACAAAAACCAATGAACTTGTTTTTGTTTTGACGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGTGTATCCTTCAAATATATAATTGCTTTTTGGATCCTCGTACCACTCCCAGAACCAGAAGCAAGAAGAGCAATGGTTGAGGAACTCCTTCCACAACATGATGGTGGGGAGCAGATCTGCTATGATTTCTTGGTGGAGCAAACAGAAGGATTTTCAGGCTCAGATATTCGTTTACTGTGTAAAGAGGCAGCGATGCAGCCCTTGAGACGCCTGATGTCACAACTTGAGCAGAGACAAGAGGTGGTGCCTGAAGAAGAGCTGCCAAAGGTGGGGCCAATCAGAACAGAAGATATAGAGGTAGCTTTGAAGAATACACGACCATCTGCTCATCTGCAGGCTCCCAAATATGAGAAGTTCAATAATGATTATGGCAGTCAAATTCTTCATTGA 1161 0.4462 MADESNTTCWSFLDFRQFYGAKYNEKKLLENGERGDMPANNGNSSGVMSNGNNHAKRPRETTIFEQFQSQGQNSSLSNGFSSNHLDERPQKPLLPPFESADMRALGESLCRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKVCDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNELVFVLTATNLPWELDAAMLRRLEKRVSFKYIIAFWILVPLPEPEARRAMVEELLPQHDGGEQICYDFLVEQTEGFSGSDIRLLCKEAAMQPLRRLMSQLEQRQEVVPEEELPKVGPIRTEDIEVALKNTRPSAHLQAPKYEKFNNDYGSQILH 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0710 386 Gene3D - 274 362 - -
Alju04g0710 386 Gene3D - 171 377 IPR027417 -
Alju04g0710 386 Gene3D - 118 169 IPR027417 -
Alju04g0710 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 369 IPR027417 -
Alju04g0710 386 FunFam Katanin p60 ATPase-containing subunit A-like 2 274 362 - -
Alju04g0710 386 Pfam ATPase family associated with various cellular activities (AAA) 172 262 IPR003959 GO:0005524|GO:0016887
Alju04g0710 386 PANTHER AAA DOMAIN-CONTAINING 172 382 - -
Alju04g0710 386 MobiDBLite consensus disorder prediction 37 55 - -
Alju04g0710 386 MobiDBLite consensus disorder prediction 31 55 - -
Alju04g0710 386 MobiDBLite consensus disorder prediction 72 92 - -
Alju04g0710 386 Pfam AAA+ lid domain 301 335 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0710 Alju-ChrAlju04 7550103 7555924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0710 153 345 Calmodulin-binding Proteins AT3G56690 30.531 1.87e-17 82.8