Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0688 ATGGACTCAAAAACTAGTGCTAGAGCTCCCCAGAAGCAGCATCATAAGACGGCTGGGATTCAAACAATAGAGGCAAAAGACATCAAATCTTCAAAGACAAGCAAATCTGAACTGGCTGCGCCAGAAGATTTATCAAAATATGTTCAGAACACATCGAAGCAGTACACTGGAGACACTGCTGAAAACAAGAAGCTAGGAATTTCAAACCCAAAGGAGTCAGCTGATTCCTTGATTAGTAAATTTGGCTCTGCTGTTTCCTTATCTGTTAATGAACAACTATCTGGAGCTGTTGATCATGTTGTTAATGGAAGTAGGGGTTTGCAGGACAGCTCTGTTAACAAGGAAAAGAAAACATCCGAATATGGAAGTGTGAAGAGTAGTTCTGCTTCTGCTAAAGTTAGTGATGGGGCCAGCAGCCTGGCAAAGACCAGTGGGAGCGCCAAGATTAGCGACCGAGCTGATCTTGTTGAGAGTGGCAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATGTGAGCGATGAGAGCACTTGCAGCAGCTTTAGTAGCAGTGTCAACAAGCCTCACAAGGCAAATGACCTGAGATGGGAAGCTATTCAAGCCGTCCGAGCTAAAGATGGGGTTTTGGGCTTAGCTCACTTTAGACTGTTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTATCAGAGTTGAGTGGAACTAAATGTTATTTCGCAATGAAGGTAATGGATAAAGGGTCCTTAGCAAGCCGTAAAAAGCTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAATCACTTGACCATCCATTTCTCCCGACATTGTATACGCATTTTGAGACAGAGAAGTTCTCATGCTTGGTGATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTCAGGCAGAAGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTACGTGGCAGAGGTACTGCTGGCGTTAGAGTACCTCCACATGCTTGGCATTGTCTACCGCGATCTCAAGCCAGAAAATGTCCTTGTTAGGGACGATGGACACATTATGCTTTCAGACTTTGACCTTTCCCTCCGTTGTACCGTTAGTCCAACTCTTGTTAAAAGTTCAGTCATGGAATCTGATCCTTTGAGAAAGAATCCTGTATATTGTGTGCAGCCTGCTTGCATTGAGCCGCCTTCCTGCATCCAGCCATCCTGTGTTGCTCCGACAACATGCTTTTCGCCTCGGCTCTTTTCTAGCAAGTCAAAGAAGGATCGGAAGCCAAAAAATGAAATTGGAAACCAAGTGACTCCATTGCCTGAGCTCATTGCTGAGCCTACCGATGCACGGTCTATGTCATTCGTGGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATATGAGCTTTTGTTTGGTAAGACTCCTTTCAAGGGATCCGGGAACCGAGCTACGTTGTTTAATGTTGTGGGCCAACCACTCCGATTTCCCGAAGCGCCTGTTGTAAGTTTTGCAGCAAGGGACCTCATAAGGGGGTTGCTTGTGAAGGAACCACAGCACAGGTTGGCTTATAAACGAGGCGCCACAGAGATAAAGCAACATCCCTTTTTTGAAGGTGTGAATTGGGCACTTATTCGCTGCGCTACCCCACCGGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCAGCCTCATCAGCTGGCGAAAAGGCCAGCCACCACATGCCAATTCCCGATCAGAAAGGTTCCGGTAATTATCTTGAGTTTGATTTCTTCTAG 1830 0.4623 MDSKTSARAPQKQHHKTAGIQTIEAKDIKSSKTSKSELAAPEDLSKYVQNTSKQYTGDTAENKKLGISNPKESADSLISKFGSAVSLSVNEQLSGAVDHVVNGSRGLQDSSVNKEKKTSEYGSVKSSSASAKVSDGASSLAKTSGSAKISDRADLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRAKDGVLGLAHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLVKSSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKNEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSAGEKASHHMPIPDQKGSGNYLEFDFF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0688 609 Gene3D Transferase(Phosphotransferase) domain 1 446 570 - -
Alju04g0688 609 CDD STKc_phototropin_like 213 571 - -
Alju04g0688 609 SUPERFAMILY Protein kinase-like (PK-like) 192 582 IPR011009 -
Alju04g0688 609 Gene3D Phosphorylase Kinase; domain 1 212 297 - -
Alju04g0688 609 FunFam Serine/threonine-protein kinase AGC1-7 445 570 - -
Alju04g0688 609 Pfam Protein kinase domain 449 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0688 609 Pfam Protein kinase domain 215 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0688 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Alju04g0688 609 MobiDBLite consensus disorder prediction 103 128 - -
Alju04g0688 609 MobiDBLite consensus disorder prediction 45 63 - -
Alju04g0688 609 MobiDBLite consensus disorder prediction 1 71 - -
Alju04g0688 609 FunFam serine/threonine-protein kinase D6PK-like 298 365 - -
Alju04g0688 609 MobiDBLite consensus disorder prediction 579 598 - -
Alju04g0688 609 SMART serkin_6 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0688 609 PANTHER FLIPPASE KINASE 1-RELATED 26 576 - -
Alju04g0688 609 Gene3D Transferase(Phosphotransferase) domain 1 298 366 - -
Alju04g0688 609 MobiDBLite consensus disorder prediction 161 182 - -
Alju04g0688 609 FunFam Serine/threonine-protein kinase D6PK-like 212 297 - -
Alju04g0688 609 ProSiteProfiles Protein kinase domain profile. 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0688 Alju-ChrAlju04 7202139 7205247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0688 34 609 AGC Kinase Gene Family AT5G47750 77.931 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju04g0688 Pkinase 1.3e-36 CL0016