Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0687 ATGGACTCAAAAACTAGTGCTAGAGCTCCCCAGAAGCAGCATCATAAGACGGCTGGGATTCAAACAATAGAGGCAAAAGACATCAAATCTTCAAAGACAAGCAAATCTGAACTGGCTGCGCCAGAAGATTTATCAAAATATGTTCAGAACACATCGAAGCAGTACACTGGAAACACTTCTGAAAACAAGAAGCTAGGAATTTCAAACCCAAAGGAGTCAGCTGATTCCTTGATTAGTAAATTTGGCTCTGCTGTTTCCTTATCTGTTAATGAACAACTATCTGGAGCTGTTGATCATGTTGTTAATGGAAGTAGGGGTTTGCAGGAAAGCTCTGTTAACAAGGAAAAGAAAACATCCGAATATGGAAGTGTGAAGAGTAGTTCTGCTTCTGCTAAAGTTAGTGATGGGGCCAGCAGCCTGGCAAAGACCAGTGGGAGCGCCAAGATTAGCGACCGAGCTGATCTTGTTGAGAGTGGCAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATGTGAGCGATGAGAGCACTTGCAGCAGCTTTAGTAGCAGTGTCAACAAGCCTCACAAGGCAAATGACCTGAGATGGGAAGCTATTCAAGCCGTCCGAGCTAAAGATGGGGGTTTGGGCTTAGCTCACTTTAGACTGTTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTATCAGAGTTGAGTGGAACTAAATGTTATTTCGCAATGAAGGTAATGGATAAAGGGTCCTTAGCAAGCCGTAAAAAGCTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAATCACTTGACCATCCATTTCTCCCAACATTGTATACGCATTTTGAGACAGAGAAGTTCTCATGCTTGGTGATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTCAGGCAGAAGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAGTATGTTGAAGTCAGAACTCCCTTTTCTTTTGTCATTAATTCTAGTGATAATTCATTAGGATTTTACGTGGCAGAGGTGCTGCTGGCATTGGAGTACCTCCACATGCTTGGCATTGTCTACCGTGATCTCAAGCCAGAAAATGTCCTTGTTAGGGACGATGGACACATTATGCTTTCAGACTTTGACCTTTCCCTCCGTTGTACTGTTAGTCCAACTCTTGTTAAAAGTTCAGTCATGGAATCTGATCCTTTGAGAAAGAATCCCGTATATTGTGTGCAGCCTGCTTGCATTGAGCCGCCTTCCTGCATCCAGCCATCCTGTGTTGCTCCGACAACATGCTTTTCGCCTCGGCTCTTTTCTAGCAAGTCAAAGAAGGATCGGAAGCCAAAAACTGAAATTGGAAACCAAGTGACTCCATTGCCTGAACTCATTGCTGAGCCTACCGATGCACGATCTATGTCATTCGTGGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATACGAGCTTTTGTTTGGTAAGACTCCTTTCAAGGGATCCGGGAACCGAGCTACGTTGTTTAATGTTGTGGGCCAACCACTCCGATTTCCCGAAGCGCCTGTTGTAAGTTTTGCAGCAAGGGACCTCATAAGGGGGTTGCTTGTGAAGGAACCACAGCACAGGTTGGCATATAAACGAGGCGCCACTGAGATAAGGCAACATCCCTTTTTTGAAGGTGTGAATTGGGCACTTATTCGCTGCGCTACCCCACCGGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCAGCCTCATCAGCTGGCGAAAAGGCCGGCCACCACATGCCAATTCCCGATCAGAAAGGTTCCGGTAATTATCTTGAGTTTGATTTCTTCTAG 1890 0.4571 MDSKTSARAPQKQHHKTAGIQTIEAKDIKSSKTSKSELAAPEDLSKYVQNTSKQYTGNTSENKKLGISNPKESADSLISKFGSAVSLSVNEQLSGAVDHVVNGSRGLQESSVNKEKKTSEYGSVKSSSASAKVSDGASSLAKTSGSAKISDRADLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRAKDGGLGLAHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKYVEVRTPFSFVINSSDNSLGFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLVKSSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIRQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSAGEKAGHHMPIPDQKGSGNYLEFDFF 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0687 629 CDD STKc_phototropin_like 213 591 - -
Alju04g0687 629 MobiDBLite consensus disorder prediction 106 128 - -
Alju04g0687 629 Pfam Protein kinase domain 215 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0687 629 Pfam Protein kinase domain 469 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0687 629 SUPERFAMILY Protein kinase-like (PK-like) 193 598 IPR011009 -
Alju04g0687 629 FunFam Serine/threonine-protein kinase D6PK-like 212 297 - -
Alju04g0687 629 FunFam Serine/threonine-protein kinase AGC1-7 465 590 - -
Alju04g0687 629 Gene3D Transferase(Phosphotransferase) domain 1 466 590 - -
Alju04g0687 629 PANTHER FLIPPASE KINASE 1-RELATED 26 596 - -
Alju04g0687 629 Gene3D Transferase(Phosphotransferase) domain 1 334 383 - -
Alju04g0687 629 Gene3D Phosphorylase Kinase; domain 1 208 331 - -
Alju04g0687 629 ProSiteProfiles Protein kinase domain profile. 214 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0687 629 FunFam Serine/threonine-protein kinase OXI1 329 386 - -
Alju04g0687 629 MobiDBLite consensus disorder prediction 1 72 - -
Alju04g0687 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Alju04g0687 629 MobiDBLite consensus disorder prediction 161 182 - -
Alju04g0687 629 MobiDBLite consensus disorder prediction 599 618 - -
Alju04g0687 629 SMART serkin_6 214 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0687 629 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0687 Alju-ChrAlju04 7192650 7195500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0687 34 629 AGC Kinase Gene Family AT5G47750 74.833 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju04g0687 Pkinase 5.5e-32 CL0016