Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0673 ATGAGAATGGCGGTGTCAAGGGGTCAGCGAAACTCAGCTGGCAGAGGAAGTGGCGGAATTAGAGAGCAAACCTTGCCGCTTACAGCCGTCGGAAAAATCATGAAGAAGGTATTACCGGCGAAGGCGAGGATCTCTAAAGAAGCGAAAGAAAGGGTCCAAGAATGCTCGTCGAAGTTCGCCGCCGTCATCGCCGAAAGAGCCGCCCAGGAGTGCAAGAACGACGGACGCTCTGAGATCGACGGCGGCGACATCATTTTGGCGATGTCCAACCTCGGATTCCATGATTACGTCGATCAACTCCAGAATTACCTGCGCCAGTATTGGAACATTGATGAGCCGGAACCGGAACCGGAGCCGGAGCCGGAGCCGGAGACGGAGCCCGAGCCGGAGACGGAGCCGGAGCCGGATATGAGTACTAGCGCTACTCCGGAATGTCGTCTCCGCCGATTCCGCGACGGCGGCGACTATCCGAATGGGATTCTTGCGGTTGGGACTGCTGAGAGTTTTCAACATTTGCCTGCTCTCATTTTGCGCAAGATTTATTGA 546 0.5568 MRMAVSRGQRNSAGRGSGGIREQTLPLTAVGKIMKKVLPAKARISKEAKERVQECSSKFAAVIAERAAQECKNDGRSEIDGGDIILAMSNLGFHDYVDQLQNYLRQYWNIDEPEPEPEPEPEPETEPEPETEPEPDMSTSATPECRLRRFRDGGDYPNGILAVGTAESFQHLPALILRKIY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0673 181 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
Alju04g0673 181 SUPERFAMILY Histone-fold 22 130 IPR009072 GO:0046982
Alju04g0673 181 Gene3D Histone, subunit A 13 143 IPR009072 GO:0046982
Alju04g0673 181 MobiDBLite consensus disorder prediction 1 22 - -
Alju04g0673 181 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 17 114 IPR027113 GO:0001228|GO:0006355|GO:0016602
Alju04g0673 181 MobiDBLite consensus disorder prediction 111 151 - -
Alju04g0673 181 MobiDBLite consensus disorder prediction 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0673 Alju-ChrAlju04 7029352 7029897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0673 21 128 CCAAT-HAP3 Transcription Factor Family AT2G47810 40.741 3.31e-27 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Alju04g0673 CBFD_NFYB_HMF 1.3e-14 CL0012