Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0669 ATGGGGAATGTGAATGCGAGAGAAGATGGGAATGGAAGTCCCTCAGGGGTTGAAGAAGAAGGTGGAGGCGGTGGCAGTGTACAGGAAGCAATTTCCGCATCGAATAATGTGTCTTCTGAGTTGATGGGTCAATCGCCTCCTACAAGCCCTAGAGCTACCCAATCTCCATTGATGTTCGCTCCGCAAGTTCCAGTGGTTCCACTTCAAAGACCTGATGATATGCAAGCCCCAGGTCATTCTTGGATGCAAGCTCCTTCAGCATACGAAGATATGTGCAATGAACAAGGAATTCCAACGATGATTACTTGGAGTTATGGTGGGAAAGAAGTAGCTGTCGAGGGATCATGGGATAATTGGAAAACAAGAGTACTCATGCAAAGATCCGGGAAAGACTTCACTATAATGAAGGTGCTGCCGTCTGGTGTGTACCAGTACAGGTTCCTAGTTGATGGGCAGTGGAGGTATGCTCCTGACCTCCCCTGGGCCCAAGATGATGCTGGCAATGCTTACAACGTTTTAGACTTGCAGGATTATGTTCCTGAGGACATTGGAAGTATTTCTAGTTTTGAACCTCCTCAGTCTCCAGAATCAAGTTATAGCAACTTACTACTTGGTTCTGAAGATTATGCAAAGGATCCACCTATGGTTCCCCCACACCTGCAAATGACGCTGCTTAACGTGCCTGCTGCAAATTCGGAAATTCCACAGCCTTTGTCAAGACCTCAACATGTAATGCTCAATCATCTCTACATGCAGAAGGGAAAGACCAGCCCTTCGGTGGTTGCGCTTGGCACGACTCATCGGTTTCTGGCCAAATATGTCACTGTGGTGCTTTACAAGTCTTTGCAGAGTGGCAAATTCATTGTCTCTGTTTCTTGTTCTTTGATTCAATCACTCCCCACAAGAGAAATTACTGCTATACACAAAATGAGAAGCCTTCCAAAACTCTCACAGCGTGTTTGGGAAGGCGTTAAGAGAGTAGAAAAGCTCAGTGGCTCAGGAAAAAGCTCAGTGGAAGAGGAGAAGCTACTTTTATGGTGTTTAGGTTCACATCTTGGTCACTGGGCTTTTCTTTCAAAAGTGGCTTTTGACAGTGAGCATTGA 1104 0.4592 MGNVNAREDGNGSPSGVEEEGGGGGSVQEAISASNNVSSELMGQSPPTSPRATQSPLMFAPQVPVVPLQRPDDMQAPGHSWMQAPSAYEDMCNEQGIPTMITWSYGGKEVAVEGSWDNWKTRVLMQRSGKDFTIMKVLPSGVYQYRFLVDGQWRYAPDLPWAQDDAGNAYNVLDLQDYVPEDIGSISSFEPPQSPESSYSNLLLGSEDYAKDPPMVPPHLQMTLLNVPAANSEIPQPLSRPQHVMLNHLYMQKGKTSPSVVALGTTHRFLAKYVTVVLYKSLQSGKFIVSVSCSLIQSLPTREITAIHKMRSLPKLSQRVWEGVKRVEKLSGSGKSSVEEEKLLLWCLGSHLGHWAFLSKVAFDSEH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0669 367 Pfam Glycogen recognition site of AMP-activated protein kinase 97 176 IPR032640 -
Alju04g0669 367 CDD E_set_AMPKbeta_like_N 98 174 - -
Alju04g0669 367 MobiDBLite consensus disorder prediction 28 55 - -
Alju04g0669 367 SUPERFAMILY E set domains 96 182 IPR014756 -
Alju04g0669 367 SUPERFAMILY AMPKBI-like 179 281 IPR037256 -
Alju04g0669 367 Gene3D Immunoglobulins 90 179 IPR013783 -
Alju04g0669 367 SMART AMPKBI_2 192 282 IPR006828 GO:0005515
Alju04g0669 367 MobiDBLite consensus disorder prediction 1 55 - -
Alju04g0669 367 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 210 280 IPR006828 GO:0005515
Alju04g0669 367 Gene3D - 185 282 - -
Alju04g0669 367 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 283 IPR043554 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0669 Alju-ChrAlju04 6982467 6987076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0669 87 177 Protein tyrosine phosphatase (PTP) family AT3G01510 29.897 6.77e-06 45.8