Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0658 ATGGGGGATCATGTTGAGATTCAACAAAAACCAGAACAAGAACCCTTGCTTAGAACTCATACTTCTTATCTCAATGAGAAGATGAATGATCTACAGAGAAGAAGGCGTCCCAGCCGCCATGGCCAAGGTTCTTCTTCTGAGAATAATGTTATCAACAACGAAGAAGAAGAAGATATGATTCATCAAAATCCTCCACCATTATCTAACTTAGATCCTGAACAATTCAAATCCATGAAACTAGTCCTATCGCTAACTGCTTACCTAGGGTTAGGAACTCTAGCCTTCTTCCTCATAAGGCATCAAATAAAGGGCATAGAGACCAATGGCTTCCTTGATGCCCTTTACTTCTGTGTTGTTACTATGACGACGGTTGGTTATGGTGACCTAGTTCCAAACAGCAAATTGGCCAAACTTCTTGCATGTATCTATGTCTTCACAGGAATGGCTCTTGTAGGGATGATCATGAGCAAAGCAGCAGATTACTTCCTTGAGAAGCAAGAAATCCTCTTCGTTAAGGCCATCCACGTCGGCGAAAAAGTGAGTCCCTCGGAGCTTCTCATGGAGGTGGAGGCACACAAAGTGAAGTACAAGTTCTTCATAGCATCAGCTGTTCTTGTAGTCCTCATGATTATAGGAACTGTTTTTCTGTGTTTGGTTGAGAATCTTGAGATTGTGGATGCCTTTTATTGTGTTTGTTCTACTGTTACTACTTTAGGGTATGGTGATAAGAGCTTCTCCACAAGTATTGGACGTGGTTTTGCTGTATTTTGGATATTGAGTAGCACTATTTGCTTGGCTCAGTTTTTCTATTATCTAGCTGAACTTTACACTGAAGATAGACAAAAATCTCTGGTCAAAACTGTTCTTTCCAGAAAACTAGTACGCTCTGATCTTGAGGCTGCAGATATTGATCATGACAATGTTGTTAGCGCTGCAGAGTTCATTGTATACAAGTTGAAGGAAATGGGAAGGATCAGCCAACAAGATATTTCTATTGTGATGGAGGCTTTTAGGAAACTCGACTTTGATAAATCAGGAACTTTGACTGAAGCTGATCTTTAA 1062 0.404 MGDHVEIQQKPEQEPLLRTHTSYLNEKMNDLQRRRRPSRHGQGSSSENNVINNEEEEDMIHQNPPPLSNLDPEQFKSMKLVLSLTAYLGLGTLAFFLIRHQIKGIETNGFLDALYFCVVTMTTVGYGDLVPNSKLAKLLACIYVFTGMALVGMIMSKAADYFLEKQEILFVKAIHVGEKVSPSELLMEVEAHKVKYKFFIASAVLVVLMIIGTVFLCLVENLEIVDAFYCVCSTVTTLGYGDKSFSTSIGRGFAVFWILSSTICLAQFFYYLAELYTEDRQKSLVKTVLSRKLVRSDLEAADIDHDNVVSAAEFIVYKLKEMGRISQQDISIVMEAFRKLDFDKSGTLTEADL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0658 353 Gene3D - 203 263 - -
Alju04g0658 353 SUPERFAMILY Voltage-gated potassium channels 74 164 - -
Alju04g0658 353 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Alju04g0658 353 SUPERFAMILY Voltage-gated potassium channels 194 325 - -
Alju04g0658 353 ProSiteProfiles EF-hand calcium-binding domain profile. 328 353 IPR002048 GO:0005509
Alju04g0658 353 Pfam Ion channel 84 162 IPR013099 -
Alju04g0658 353 Pfam Ion channel 204 276 IPR013099 -
Alju04g0658 353 MobiDBLite consensus disorder prediction 27 41 - -
Alju04g0658 353 PRINTS Two pore domain K+ channel signature 236 245 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju04g0658 353 PRINTS Two pore domain K+ channel signature 119 147 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju04g0658 353 ProSitePatterns EF-hand calcium-binding domain. 302 314 IPR018247 -
Alju04g0658 353 Gene3D - 74 169 - -
Alju04g0658 353 MobiDBLite consensus disorder prediction 1 50 - -
Alju04g0658 353 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 62 331 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju04g0658 353 Gene3D - 264 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0658 Alju-ChrAlju04 6897059 6899107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0658 56 353 Ion Channels AT5G55630 56.066 3.98e-126 365