Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0651 ATGGGGCGTTCTCGTGGGAATTTCCACGCTGATGAGGACCCCAATCAAAGGTCAAGGAGGAAAAAGAATGCCGCTAGTGGAGATATTACAGAACCTGGAGCTGCAGGTCAAGGAACAAGTGAAGGAAAAAAGGCTTTGTACCATTGCAACTACTGTAACAAAGATATTACAGGAAAAATACGTATTAAGTGTGCCATGTGTCCTGATTTTGACCTATGTATAGAGTGCTTTTCTGTGGGAGCTGAGGTGACACCTCATAAAAGCAATCACCCTTACAGGGTTATGGACAATCTATCATTCCCTCTCATTTGCGCAGATTGGAATGCAGATGATGAAATTCTGCTTCTGGAGGGAATTGAAATGTATGGCCTGGGGAACTGGGCGGAAGTTGCTGAGCATGTTGGGACAAAGAATAAAGAAGCATGCATAGAACACTATAGGAATGTTTACTTGAACTCCAAAACCTTTCCTCTCCCGGACATGTCCCATGTTGTTGGTAAAAACAGAAAGGAGCTGCTTGCTATGGCTAAAGGGCAAGGCGATGACAAAAAAGGGATTCCTATGGGGGATCTTAGTATAAAGGAAGAATCTCCATTTTCTCCAGCTAGAGTCAAAGTTGAAGATTCTCATAAAGCTGGTAATTCTAGCTGTTTACAGTCCAACTTAAATTCAGAATCAGAATCTGGACCTGCTAGTGGCTCGCATACTGCAGCAACTGCTAACCAGAGGGCATCTAATGTGGGACGGGGCAAAGATGGTCCTGGAGTTATTAAAATGGAAGATTCTCAACTAGAAAAATATTCTGGAGGAAACAAGCCAAGTTCCTCTGGAAATGAAGATCCTTCTTTAGTACAGTTGAGTGGTTATAACCCCAAACGACAGGAATTTGATCCTGAATATGATAATGATGCTGAACAATTACTTGCTGAAATGGAATTTAAGGACACTGACACGGATGATGAACGGGAACTGAAACTACGCGTTCTGCGTATATATTCGAAAAGGCTTGATGAAAGAAAGCGTAGAAAGGATTTCATACTTGAAAGAAACTTGTTATACCCAAATCCTATCGAGAAGGATTTAACACCTGAAGAGAGGACACTATGTCGAAAATATGATGTATTCATTCGCTTTCATACCAAGGAAGACCATGAGGAATTGCTTAGATCAGTAATCTCTGAGCACAGAACTCGTAGAAGAATTGAGGACCTTCAGGAGGCCCGAGCTGCTGGTTGCCGCACGGCAGCTGAAGCAGATAGATATCTTGAACAGAAGAGAAGAAGAGAGGCAGAAGAAAGTGCTCGTAGGTCAAAAGAAAGAGCTCAGGCTGGTCCAAACAATCATGGGGTTCCAAGTGCATTCATGTCTCCAGACTCTGCAGGCAAGGATTCAAGTGGAAGACCAGCAGGGCCTGCTGGTTCAAGCTCTGTCAATGAAATGGATGTGACAGGATATTATGGGGCTGATCTACTTTCTGTACCTGAAAAACGTCTATGCTGTGAACATAGGTTGCCTCCAGCAATCTTCCTGAAGATGCAAGAGGTTCTGTCTGTACAAATACTGAGTGGCAATATCACTGCAAAATCTGATGCCCACCACTTATTCAATATGGATAGCAGCAAGATTGATTGCGTGTTCGATTTACTTGTGAAGAAGGGGATTGCTATGCCCTGA 1674 0.4313 MGRSRGNFHADEDPNQRSRRKKNAASGDITEPGAAGQGTSEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICADWNADDEILLLEGIEMYGLGNWAEVAEHVGTKNKEACIEHYRNVYLNSKTFPLPDMSHVVGKNRKELLAMAKGQGDDKKGIPMGDLSIKEESPFSPARVKVEDSHKAGNSSCLQSNLNSESESGPASGSHTAATANQRASNVGRGKDGPGVIKMEDSQLEKYSGGNKPSSSGNEDPSLVQLSGYNPKRQEFDPEYDNDAEQLLAEMEFKDTDTDDERELKLRVLRIYSKRLDERKRRKDFILERNLLYPNPIEKDLTPEERTLCRKYDVFIRFHTKEDHEELLRSVISEHRTRRRIEDLQEARAAGCRTAAEADRYLEQKRRREAEESARRSKERAQAGPNNHGVPSAFMSPDSAGKDSSGRPAGPAGSSSVNEMDVTGYYGADLLSVPEKRLCCEHRLPPAIFLKMQEVLSVQILSGNITAKSDAHHLFNMDSSKIDCVFDLLVKKGIAMP 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0651 557 MobiDBLite consensus disorder prediction 420 442 - -
Alju04g0651 557 SUPERFAMILY RING/U-box 47 109 - -
Alju04g0651 557 FunFam Transcriptional adapter 40 95 - -
Alju04g0651 557 SUPERFAMILY Homeodomain-like 100 153 IPR009057 -
Alju04g0651 557 Gene3D - 472 555 IPR036388 -
Alju04g0651 557 MobiDBLite consensus disorder prediction 176 190 - -
Alju04g0651 557 ProSiteProfiles Zinc finger ZZ-type profile. 44 100 IPR000433 GO:0008270
Alju04g0651 557 ProSitePatterns Zinc finger ZZ-type signature. 49 76 IPR000433 GO:0008270
Alju04g0651 557 Gene3D - 38 95 IPR043145 -
Alju04g0651 557 MobiDBLite consensus disorder prediction 176 297 - -
Alju04g0651 557 ProSiteProfiles SANT domain profile. 102 154 IPR017884 -
Alju04g0651 557 ProSiteProfiles SWIRM domain profile. 471 557 IPR007526 GO:0005515
Alju04g0651 557 FunFam Transcriptional adapter 2 472 556 - -
Alju04g0651 557 MobiDBLite consensus disorder prediction 267 289 - -
Alju04g0651 557 MobiDBLite consensus disorder prediction 420 478 - -
Alju04g0651 557 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 47 552 - -
Alju04g0651 557 ProSiteProfiles Myb-like domain profile. 107 150 IPR001005 -
Alju04g0651 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 154 IPR017930 -
Alju04g0651 557 MobiDBLite consensus disorder prediction 1 41 - -
Alju04g0651 557 SUPERFAMILY Homeodomain-like 464 554 IPR009057 -
Alju04g0651 557 FunFam Transcriptional adapter 2 100 152 - -
Alju04g0651 557 PIRSF Txn_adaptor_ADA2 34 556 IPR016827 GO:0003713|GO:0006357|GO:0035065
Alju04g0651 557 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Alju04g0651 557 MobiDBLite consensus disorder prediction 1 26 - -
Alju04g0651 557 Gene3D - 101 152 - -
Alju04g0651 557 SMART sant 103 152 IPR001005 -
Alju04g0651 557 MobiDBLite consensus disorder prediction 212 246 - -
Alju04g0651 557 CDD SANT 107 149 IPR001005 -
Alju04g0651 557 SMART zz_5 43 88 IPR000433 GO:0008270
Alju04g0651 557 CDD ZZ_ADA2 47 95 IPR041983 -
Alju04g0651 557 Pfam Zinc finger, ZZ type 45 87 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0651 Alju-ChrAlju04 6830344 6835524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0651 1 554 EF-hand Containing Proteins AT3G07740 46.805 5.69e-160 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju04g0651 Myb_DNA-binding 3.1e-11 CL0123