Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0641 ATGCAAACAACTCAGAAACACCCTAGTTCAGTTGGTTTCCATCTGTATCACCAGCCGATGCATAACTCAGACTCTTGCCATTTGTCTCGTTTCCAGATTTTGCCAAGCAATTCATATCATGAACTCGTTGATGATAGCAGCCAGGGAACCACAGTTTCTTTTGAGAACTACAACCAACAATACTTTACTCTTGAATCGTCCACACCACCACCACCACCACCACCCCCTGGCCCCATAGCCTGTGATTCCTCTTCCTTTGCTAGCAATTCATCCAATAGGAGTGCTTTTTCACCACAAGGTTCTCAGACTCAATCATCCCTTTCAGATCAGCACCAGTCCCTGGATAACACCTATGGATCACCAATCAGTGGCTGCTCCAGTGTTGATGGTGGCAACGAATGGAAGCACAGGCTCAAGGAATTAGAGCAAGAATTGTTGGGACCTGAGTCAGATATTGTTGACAGCTGTGGTTTCTGCACCGAGGGCGGCCACCAGCAAGCATCTCTAAAGTCTGGGTGGAATTGGGACCAGATTGTTGAAATGATCCCTAAACTTGACTTGAAAGAGGTCCTGATTAAGTGTGCACAAGCTGTGTCCAATGGCGATTTTCAAACAGCAACAGGTTTGATGGATAAAGTATTGGTGAAGATGGTGTCAGTTTCTGGGGATCCACTTCAGAGGCTGGGAGCTTACATGTTGGAGGGGCTTAGAGCGAGGGTGGTATCAACTGGGAGTATCATCTACAAATCTCTGAAGTGTGAGCAAGAACAAACTCCAACAAGCAAAGAACTGATGAACTACATGGGCATCCTCTATAAGATTTGCCCATATTGGCAGTTTGCTTACACATCTGCCAACGCTGTCATCGTAGAAGCAATGCAAAATGAATCCAGAATTCATATAATTGACTTCCAAATTGCACAGGGCACCCAGTGGAAGTTACTGATTCAGGCTCTAGCTCAGCGGCCTGGTGGTCCCCCATACATTCGTGTAACTGGTGTTGATGACTCCCAATCTTTTCATGCTCGAGGTGGAGGGCTTCATATTGTAGGACAAAATTTGGCAAATCATGCCAAATCCCTTGGAGTGCCGTTCGAGTTCCATAGTGCTGCCATGTCTGGCTGTGAGGTTCAACTTGAGAACCTAGGAGTTCGACCCGGGGAAGCCGTGGCTGTGAACTTCCCTTATGTTCTGCACCACATGCCTGATGAGAGTGTTAGCACAGAGAACCATAGAGACAGGTTACTGAGATTGGTCAAGAGCCTGTCACCCAAAGTTATGACCCTTGTTGAGCAGGAATCCAACACCAACACTTCTCCCTTTCTCCAAAGGTTTATTGAGACACTAAGTTACTATACAGCCATGTTTGAATCGATCGATGCGGGAAGCTCTAATAGAGAAGATAAAGAGCGTATTAGTGCAGAACAACAGTGTGTAGCTCGAGACATTGTCAACATGATAGCTTGTGAGGAAAGAGAGAGGGTAGAGCGGCATGAACTTCTAGGGAAGTGGAGGTCAAGACTTGCCATGGCCGGTTTTAAACAATACCCGTTGAGTGCCCCAACTACAGCTGCAGTCAGAAATTTATTGAAGGGTTTCAAAGACAAGTACAGGCTTGAATACAGAGATGGCGCTCTTTATCTTTTTTGGATGAACAGAGCTATGAGCACCTCTTCCGCTTGGTGGTGA 1689 0.463 MQTTQKHPSSVGFHLYHQPMHNSDSCHLSRFQILPSNSYHELVDDSSQGTTVSFENYNQQYFTLESSTPPPPPPPPGPIACDSSSFASNSSNRSAFSPQGSQTQSSLSDQHQSLDNTYGSPISGCSSVDGGNEWKHRLKELEQELLGPESDIVDSCGFCTEGGHQQASLKSGWNWDQIVEMIPKLDLKEVLIKCAQAVSNGDFQTATGLMDKVLVKMVSVSGDPLQRLGAYMLEGLRARVVSTGSIIYKSLKCEQEQTPTSKELMNYMGILYKICPYWQFAYTSANAVIVEAMQNESRIHIIDFQIAQGTQWKLLIQALAQRPGGPPYIRVTGVDDSQSFHARGGGLHIVGQNLANHAKSLGVPFEFHSAAMSGCEVQLENLGVRPGEAVAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFLQRFIETLSYYTAMFESIDAGSSNREDKERISAEQQCVARDIVNMIACEERERVERHELLGKWRSRLAMAGFKQYPLSAPTTAAVRNLLKGFKDKYRLEYRDGALYLFWMNRAMSTSSAWW 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0641 562 MobiDBLite consensus disorder prediction 82 122 - -
Alju04g0641 562 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 121 550 IPR005202 -
Alju04g0641 562 Pfam GRAS domain family 187 561 IPR005202 -
Alju04g0641 562 ProSiteProfiles GRAS family profile. 178 562 IPR005202 -
Alju04g0641 562 MobiDBLite consensus disorder prediction 66 80 - -
Alju04g0641 562 MobiDBLite consensus disorder prediction 63 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0641 Alju-ChrAlju04 6709322 6711010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0641 1 561 GRAS Transcription Factor Family AT4G17230 56.560 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju04g0641 GRAS 1.3e-125 CL0063