Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0551 ATGGCCACCTTAACCCCAATAATCCTGCTCCTTTTTTCATGCTTTCTTCTTACATACTTGACTACAACCTCGAACGCAGATTCAACAGACAATAATTACCTCAATACTACCGAGCTCAATTCAAGCTATACTCTCGTATCTGAGAATCTTATTCTCAACACCATAGATTCTTGTTGGAGATCCAACTCAAACTGGGCATCAAATCGCCAAGCCCTAGCTGATTGTGCTGTTGGATTTGGTAAAGATGCCATTGGAGGTAAGTTTGGTGCTATATATGAGGTCAATGATGCCTCCGATGATCCTGTGAACCCTAAACCAGGGACACTTCGTTATGGTGTGATCCAAACACAGCCTCTTTGGATAATATTCGTCAAGGACATGGTTATTACCCTCGAGAACGAGCTTATAGTGAATAGCGATAAGACCATTGATGGTAGAGGAGCCACAGTGGAGATTGCTTATGGACCTTGCATTACCATTCAAGATGTTACTCACGTCATTATTCATGGGATTAGCATCCATGATTGAAAAGTTGGGATGGTTAGGAGTAGTGAAGAGCATGTGGGGCACAGAGGAGGCTCACATGGAGATGGCATTACCATATTTGGTTCTTCCAATATTTGGATCGAGCATTGCTTCTTGGCTCGTTGTACAGATGGCCTTATTGATGTTATTCATGCCTCAACTTCTGTCACTCTCTCTAACAATTACTTTACCCAGCATGACAAAGTAAGCCGAACAAATTTTAATTAA 753 0.4183 MATLTPIILLLFSCFLLTYLTTTSNADSTDNNYLNTTELNSSYTLVSENLILNTIDSCWRSNSNWASNRQALADCAVGFGKDAIGGKFGAIYEVNDASDDPVNPKPGTLRYGVIQTQPLWIIFVKDMVITLENELIVNSDKTIDGRGATVEIAYGPCITIQDVTHVIIHGISIHDXKVGMVRSSEEHVGHRGGSHGDGITIFGSSNIWIEHCFLARCTDGLIDVIHASTSVTLSNNYFTQHDKVSRTNFN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0551 250 Gene3D - 52 248 IPR012334 -
Alju04g0551 250 PANTHER PECTATE LYASE 18-RELATED 39 245 IPR045032 GO:0030570
Alju04g0551 250 SUPERFAMILY Pectin lyase-like 53 245 IPR011050 -
Alju04g0551 250 PRINTS Pollen allergen Amb family signature 134 150 IPR018082 -
Alju04g0551 250 PRINTS Pollen allergen Amb family signature 195 216 IPR018082 -
Alju04g0551 250 PRINTS Pollen allergen Amb family signature 75 92 IPR018082 -
Alju04g0551 250 PRINTS Pollen allergen Amb family signature 98 123 IPR018082 -
Alju04g0551 250 SMART amb_all 126 250 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0551 Alju-ChrAlju04 5638096 5639356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0551 7 244 Polysaccharide Lyase AT4G22080 63.485 1.20e-107 314