Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0543 ATGATGCGTCTCGCTCTCGACTCTTCTCACACCCACGCCATGCTTCCCTCCTTAGGCTTTCCCGTCAATCTCTCCCGCCCCTCCGCCGCCGCCGCCGACTCCTCCCGCCTCCCTTCCGCCGAGCTCGACTTCTTCTCCGATCGAAACCACCCTCCCCCTCCCCCTCCGCCTCTTAAACCCGTCAAGAACGAGATTCCGACCCCCGATGTCAACACTGGCCTGCAACTCCTTACTGCTCATACCGGCAGCGATCAGTCCACCGTCGATGACGGCGTTTCATCTGATGCTGAAATCAAGCGAGCCAAGAGTTCCAACGAGTTGGCGCAACTGCAAGAGGAGCTACAGCGTATGAATGCGGAAAACGTGAAGCTGAGGGACATGTTGAGCCATGTGAGCAATAATTACACGGCTCTGCAAATGCATCTCGTTGCGTTAATGCAGCAGCAGCAACACCAACAGATTCAACGTACCCAGAGCACGGCAAATGAGGTTGTTCAATCAAAACCTGATGACAAAAGAGAAATTGTACCCATGCCGCTTCTGGAATTAGGGCCTAGTAGCGGAACAGCTGAGATAGATAATAACGAGGTGTCCAATTCAACTTCCGATGAAAGAACACGATCCACCACTCCTCCTCTTAACACCAACAACGGTAAAAATAATGAAAGAGAAGAGAGTCCATACTCAGATGGTCACCCACATGGTTGGGGCAATAGTGGTCCTAACAAGCTTCAGAAGCCAAACCCCTCATCATCAAACTCCGCCGACCCATCAACCAGTAGCGCCACTGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCTGAAGCACCCATGATCAGTGATGGGTGTCAATGGCGAAAGTACGGGCAGAAAATGGCGAAGGGAAACCCTTGTCCTCGTGCTTATTATAGATGCACCATGGCTGTCGGTTGCCCAGTTCGAAAACAAGTACAACGTTGCGCCGAGGACAGGACGATTTTGATAACTACCTACGAAGGAAGCCATAACCATCCACTGCCACCGGCGGCGATGGCGATGGCATCAACGACGGCGGCTGCTGCGAGCATGTTGTTGTCAGGTTCAATGTCAAGTGCAGACGGGATAATGAATCCGAATTTGCTGGCCAGAGCGATTCTTCCGTGTTCGTCTACCATGGCTACACTTTCTGCTTCAGCTCCATTTCCTACTATAACATTGGACCTCACCCACAATTCAAACGGTACCATTAATAACAACCCTATGCAATTTCAGAGACCACCATTTCAGGTGCCAAATTTTCAAGGGCAGCCTCAAGTTCAACTAACCGGGTCCGGTCAGCATCATCAGTTGGCTCAGGCATTTTCACAAGCACTTTACAATCAATCCAAGTTTTCTGGCCTTCACATGTCTCAGGATATGGGCTCGTCGTCTTCATCTTCTTCCCAATTAGCCCAACAACCGCCCACCAGGCCGCCGCAGCCGATGTCGCCGTTGGCAGACACTGTCAGCGCCGCCACCGCAGCCATCACCGCCGACCCAAACTTCACAGCAGCTCTCGCTGCCGCCATCTCCTCCATCATCAATGGCGGCGGTGTTCCCTCTAACAACAACAATAGCAGCGGCAATCCCAACATTACCAGCGGTACCACAATCAGTAGTTTCTCGGGGAATCAATAA 1671 0.5212 MMRLALDSSHTHAMLPSLGFPVNLSRPSAAAADSSRLPSAELDFFSDRNHPPPPPPPLKPVKNEIPTPDVNTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSNELAQLQEELQRMNAENVKLRDMLSHVSNNYTALQMHLVALMQQQQHQQIQRTQSTANEVVQSKPDDKREIVPMPLLELGPSSGTAEIDNNEVSNSTSDERTRSTTPPLNTNNGKNNEREESPYSDGHPHGWGNSGPNKLQKPNPSSSNSADPSTSSATAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTAAAASMLLSGSMSSADGIMNPNLLARAILPCSSTMATLSASAPFPTITLDLTHNSNGTINNNPMQFQRPPFQVPNFQGQPQVQLTGSGQHHQLAQAFSQALYNQSKFSGLHMSQDMGSSSSSSSQLAQQPPTRPPQPMSPLADTVSAATAAITADPNFTAALAAAISSIINGGGVPSNNNNSSGNPNITSGTTISSFSGNQ 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0543 556 MobiDBLite consensus disorder prediction 466 484 - -
Alju04g0543 556 MobiDBLite consensus disorder prediction 526 556 - -
Alju04g0543 556 Gene3D WRKY domain 269 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g0543 556 FunFam probable WRKY transcription factor 31 269 346 - -
Alju04g0543 556 MobiDBLite consensus disorder prediction 241 267 - -
Alju04g0543 556 MobiDBLite consensus disorder prediction 48 63 - -
Alju04g0543 556 MobiDBLite consensus disorder prediction 466 496 - -
Alju04g0543 556 ProSiteProfiles WRKY domain profile. 279 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g0543 556 SUPERFAMILY WRKY DNA-binding domain 277 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g0543 556 Coils Coil 93 134 - -
Alju04g0543 556 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 79 538 IPR044810 GO:0003700
Alju04g0543 556 Pfam WRKY DNA -binding domain 286 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g0543 556 SMART WRKY_cls 284 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g0543 556 MobiDBLite consensus disorder prediction 27 70 - -
Alju04g0543 556 MobiDBLite consensus disorder prediction 525 556 - -
Alju04g0543 556 MobiDBLite consensus disorder prediction 153 281 - -
Alju04g0543 556 MobiDBLite consensus disorder prediction 188 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0543 Alju-ChrAlju04 5501762 5504281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0543 20 540 WRKY Transcription Factor Family AT1G62300 52.277 1.32e-151 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju04g0543 WRKY 5.8e-24 CL0274