Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0540 ATGGAGTGGAGTAGGGGCCACATCATCGGCCGGGGTTCCACCGCCACCGTGTCGGTTGCTGAGTGTCGTCGGTCTAGTCGGATGTTTGCGGTGAAGTCGGTGGAGCTTCAACGGTCGGAATTGCTCAGGAGAGAACAGAGTATTCTCTCCATATTGGAGTGTCCTCATGTTGTGGCATACGAAGGTTGTGACACTACATTTGAAAATGGCGCGTTCATGTATAACTTGTTCATGGAGTACGCGCCTTACGGGTCAATCGCCGACGAAATTCGCGAGCGTGACGGTGGGTTGGATGAGATTATGGTTGGACGTTATGCTCGTCAGATTCTGCTTGGGTTGAATTACTTACATTCCAATGGGATAGTGCATTGTGATTTGAAAGGTCAGAATGTTTTGATTACCGATGAAGGGGCTAAAATTGCTGACTTGGGTTGTGCCCGGAGGATTACGGCGGCGCCGTATTATGGTGGGGTGATTGCCGGCACTCCGGCATTCATGGCACCAGAGGTGGCGCGTGGGGAGGAGCAGGGGTTCTCTGCTGACGTGTGGGCTCTCGGCTGTACTGTGCTTGAGATGATCACCGGAAAAGTGCCGTGGCATGACGTTTCCGACCCGGTGAGTCTCCTCTATCGGGTCGGTTTCTCCGGTGAGCTGCCGGAGATTCCGAATTTATTGTCGGAGCAAGGGAAGGATTTTGTCACCATGTGTTTGAAAACAGATCCGAAGGAGAGGTGGTCAGCAAGTGAGCTTCTCAAACATGAGTTCGTTCAGGATTCAAGCAATGAGTCGAAGAAATTTGATGATTCTAGCTCAAATTCTCCAACTAGTGTGTTGTTGGATCGAGATTTCTGGGACTCGTTTGACGGGTATCAGAAAACCCAAACACCGGATCCGAACCCAAACCGGACCCACGATCATGTGTTTTCTTGGGATCCTCCTAGTCCCAGAAGTAGAATTCGTAGGTTGTCTTCCTCTATACCCAATTGGGAATGTGAGGACGAATGGGTCACAGTAAGAGAAAGAAGCAACAGAGAATCAGGGAGAATCTTCAATGGCAGAGAATCTAATGAAGAAACAGAGAATTATGGATTAGACAGTTCAAATTACATTAGGGAGGACAATTATTTGGTTGTTACTAATGAACCCAGAACAGTTAGTATAGTTGGATTGAGCGAGTGTTGTAATATTGATGATGATTGTTGTATCAGAGAATCTTTATTCATATGTTCACAATGTATAAATATGGCTCTCAATAGAAATATTTTGCATGACTTGCTTTTGGCTTTCCCTCTCTAA 1296 0.4699 MEWSRGHIIGRGSTATVSVAECRRSSRMFAVKSVELQRSELLRREQSILSILECPHVVAYEGCDTTFENGAFMYNLFMEYAPYGSIADEIRERDGGLDEIMVGRYARQILLGLNYLHSNGIVHCDLKGQNVLITDEGAKIADLGCARRITAAPYYGGVIAGTPAFMAPEVARGEEQGFSADVWALGCTVLEMITGKVPWHDVSDPVSLLYRVGFSGELPEIPNLLSEQGKDFVTMCLKTDPKERWSASELLKHEFVQDSSNESKKFDDSSSNSPTSVLLDRDFWDSFDGYQKTQTPDPNPNRTHDHVFSWDPPSPRSRIRRLSSSIPNWECEDEWVTVRERSNRESGRIFNGRESNEETENYGLDSSNYIREDNYLVVTNEPRTVSIVGLSECCNIDDDCCIRESLFICSQCINMALNRNILHDLLLAFPL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0540 431 SUPERFAMILY Protein kinase-like (PK-like) 3 312 IPR011009 -
Alju04g0540 431 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Alju04g0540 431 Pfam Protein kinase domain 5 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0540 431 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0540 431 Gene3D Transferase(Phosphotransferase) domain 1 2 299 - -
Alju04g0540 431 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0540 431 CDD STKc_MAPKKK 2 256 - -
Alju04g0540 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Alju04g0540 431 MobiDBLite consensus disorder prediction 289 320 - -
Alju04g0540 431 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0540 Alju-ChrAlju04 5456251 5457546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0540 3 345 MAP Kinase Kinase Kinase AT5G55090 49.577 7.20e-105 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju04g0540 Pkinase 7.2e-53 CL0016