Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0533 ATGCCTCTCTATTCCATTTCTTCCTTTTCTCCTCCTCTTAGCAGTGTTGATAATAGCGGCGTCTCTGAACCATCTCCGGTGAGGCTTGGAAACTGGGGTCCCAATAATGCTGCATCGCTATCGCCGGAGATAAGCCGGAATTGGCCGGCGACTAGGCCCTATGTTCGATCCAAGTTGCCTCGCCTTCGCTGGACACCGGATCTTCATGAACGTTTTTTGCACGCAGTTAAGAGTCTTGGTGGAGAACACAGGGCAACACCAAAGTCAGTTTGGGAGCTGATGAATGTGAATGGACTCACCATCTCTCATGTTAAGAGCCACCTTCAGATGTACAGGAGCATTAAGCATGAGAGTGAAGAAACAAATAAGAGAAGTTTGGGAGAAGAAGCGTTACATTCGTCAAGCTATGGGCAACAGAATGTTGGTAATGAGGAGGAAGCAAATGAAGAATCCATCAACCTCGGAATTCTGGAACAGAGCTACCCAACTTATTGTCATATGAATCAGCATCCTCATCCTGGAATCCAAACACAATGGAATCATGGGAGTGTGTCGCTAGGTTCCAGGAACGTGCAACACAAGATCCGCCCCTCCTACATCATCTTCAACGATCTCTTCAAGACCCTTCATAATCCCCAAGAGACGATGAATGATGCTGCAGAAAGGGTGTTGCCTTATCAAAGCCAACTTGAAAATACAAGTGATATGTCATCAAGAGGTTTGTTTCAGCCGTATGATAATAAAAACGACGACGTCTCACTTGAGCTCACTCTGGCTCAGCCTGCTGCTACAAGCTCCATTACTTATGCAAGGAAGTTTGGGAATGATCACCAGCGTTCTTATGGATTTGGCCAAGACAAGACCTTCTTTCACCACTTTTCCGGCTACGTTGGTGGTGGATTTGGCTTTGGAGGCGGATTCGGATATGGGAATGGAGGACGTGGTGGTGGTTGGGGTGGAGGTGGAGGTGGAGGCGGAGGTGGCGGATTCGGTGGAGGGTTTACCAAGGGCCTGCAACCTTAG 1023 0.4819 MPLYSISSFSPPLSSVDNSGVSEPSPVRLGNWGPNNAASLSPEISRNWPATRPYVRSKLPRLRWTPDLHERFLHAVKSLGGEHRATPKSVWELMNVNGLTISHVKSHLQMYRSIKHESEETNKRSLGEEALHSSSYGQQNVGNEEEANEESINLGILEQSYPTYCHMNQHPHPGIQTQWNHGSVSLGSRNVQHKIRPSYIIFNDLFKTLHNPQETMNDAAERVLPYQSQLENTSDMSSRGLFQPYDNKNDDVSLELTLAQPAATSSITYARKFGNDHQRSYGFGQDKTFFHHFSGYVGGGFGFGGGFGYGNGGRGGGWGGGGGGGGGGGFGGGFTKGLQP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0533 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 116 IPR017930 -
Alju04g0533 340 FunFam Myb family transcription factor 58 116 - -
Alju04g0533 340 MobiDBLite consensus disorder prediction 1 33 - -
Alju04g0533 340 NCBIfam myb-like DNA-binding domain, SHAQKYF class 60 114 IPR006447 GO:0003677
Alju04g0533 340 MobiDBLite consensus disorder prediction 128 150 - -
Alju04g0533 340 SUPERFAMILY Homeodomain-like 59 114 IPR009057 -
Alju04g0533 340 Gene3D - 59 117 - -
Alju04g0533 340 MobiDBLite consensus disorder prediction 1 25 - -
Alju04g0533 340 MobiDBLite consensus disorder prediction 119 150 - -
Alju04g0533 340 Pfam Myb-like DNA-binding domain 62 112 IPR001005 -
Alju04g0533 340 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 45 263 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0533 Alju-ChrAlju04 5408507 5414417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0533 51 112 G2-like Transcription Factor Family AT1G14600 70.968 2.70e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju04g0533 Myb_DNA-binding 1.3e-07 CL0123