Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0518 ATGAGCGAATCAAATCACCACACAAATGACAAAGACAAAAGATCAGGTCTTAGGGATACCAACAGGCTTCAATTCTCTGAAGATGAAGATTCTCTCATTGCTAGGATGTTTAGTTTGGTTGGAGACAGGTGGTCTCTTATAGCTGGCAGAATCCCAGGGAGGAGCGCTCAAGAGATTGAGAATTATTGGACTTCAAAGTGCACTTCTTCAACTGAAACATCAAGTTCTCATGCTGACGCTTAA 243 0.4198 MSESNHHTNDKDKRSGLRDTNRLQFSEDEDSLIARMFSLVGDRWSLIAGRIPGRSAQEIENYWTSKCTSSTETSSSHADA 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0518 80 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Alju04g0518 80 SUPERFAMILY Homeodomain-like 21 65 IPR009057 -
Alju04g0518 80 CDD SANT 25 63 IPR001005 -
Alju04g0518 80 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 71 IPR017930 -
Alju04g0518 80 Gene3D - 24 80 - -
Alju04g0518 80 SMART sant 21 69 IPR001005 -
Alju04g0518 80 MobiDBLite consensus disorder prediction 1 25 - -
Alju04g0518 80 Pfam Myb-like DNA-binding domain 23 64 IPR001005 -
Alju04g0518 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 19 70 - -
Alju04g0518 80 FunFam MYB-like transcription factor 24 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0518 Alju-ChrAlju04 5258864 5260435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0518 19 65 MYB Transcription Factor Family AT1G22640 55.319 3.90e-15 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju04g0518 Myb_DNA-binding 2.6e-09 CL0123