Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0515 ATGGATCAGCCACGGGTAGTATTGGAACCGCCGCCGTCATCGCAGCCGCCCGTGACGGTCCCGGCGAAACCCACCTCCCTGAATGTCAGAACCCCGCAGCAGAAGCCAGAAGCTACGATTCTGGGAAAGCCTCTTGAAGATGTTAAGAGATTCTACACTCTTGGCAAAGAGCTTGGGAGAGGGCAATTTGGTATTACCTATTTGTGCACAGAGAATGCCACTGGGTGCACTTATGCGTGCAAATCGATATTGAAGAGGAAGCTTGTGTCTAAAGCGGATAAGGAAGATATGAAGAGGGAAATTCAGATTATGCAGCATTTATCTGGGCAACCCAACATTGTTGAGTTTAAGGGTGCTTATGAAGATAGATATTCTGTGCACCTTATAATGGAGCTCTGTGCTGGTGGGGAGCTATTTGATCGAATCATAGCTCAGGGTCACTATTCAGAGAGAGCTGCTGCATCAATTTGCAGAGCTATTGTTAATGTTGTGCACATTTGCCACTTCATGGGGGTGATGCATCGTGATCTGAAGCCTGAAAATTTCCTGCTCTCTAGCAAAGATGAGGGAGCAACGCTTAAGGCTACTGATTTTGGGCTATCCGTATTCATTGAAGAAGGGAAGGTTTACCATAATATGGTAGGCAGTGCTTATTATGTTGCTCCTGAGGTATTGCGTCGTAGTTACGGAAAGGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTCCTTAGTGGTGTCCCTCCTTTTTGGGCTGAAAATGAAAAGGGAATATTTGATGCTATATTGGAAGGAAACATTGACTTTGAAAGTCAACCATGGCCCTCAATATCAGATAGTGCTAAAGATTTAGTCAGGCAGATGTTGACACAGGATCCAAAGAAGCGAATTACTTCTGCACAAGTCCTTGAACATCCATGGATCAGAGAAGGTGGAGAGGCATCAGATAAGCCAATTGACAGCGCAGTTCTGTTGAGAATGAAGCAATTCAGGGCAATGAACAAGCTCAAAAAGCTCGCGCTGAAGGTCATTGCCGAAAATCTTTCTGAAGAAGAGATTAAAGGTCTCAAAGCAATGTTCACCAATATGGACACTGACAATAGTGGCTCTATCACCTATGAAGAACTGAAGACAGGTTTGGCCAGGATTGGATCACAACTATCTGAGGCTGAAGTGAAGCAACTTATGGAAGCTGCTGATGTTGATGGGAATGGAACGATTGACTATATCGAATTCATCTCAGCCACAATGCACAGGCACAGACTTGAGCGAGATGAGCACTTATACAAAGCATTTCAGTATTTTGATAAGGATAACAGTGGGTATATTACTAGAGATGAATTGGAGACTGCTATGACAGAGCATGGAATGGGTGATGAAGCGACAATTAAGGAAATAATATCTGAGGTGGATGCAGATAACGATGGGAGAATAAACTATGAGGAATTCTGCACAATGATGAGGAGTGGAATGCAGCACCAAGGACAACTTTTTTAA 1503 0.4371 MDQPRVVLEPPPSSQPPVTVPAKPTSLNVRTPQQKPEATILGKPLEDVKRFYTLGKELGRGQFGITYLCTENATGCTYACKSILKRKLVSKADKEDMKREIQIMQHLSGQPNIVEFKGAYEDRYSVHLIMELCAGGELFDRIIAQGHYSERAAASICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGKVYHNMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAENEKGIFDAILEGNIDFESQPWPSISDSAKDLVRQMLTQDPKKRITSAQVLEHPWIREGGEASDKPIDSAVLLRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDNSGSITYEELKTGLARIGSQLSEAEVKQLMEAADVDGNGTIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELETAMTEHGMGDEATIKEIISEVDADNDGRINYEEFCTMMRSGMQHQGQLF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0515 500 ProSiteProfiles Protein kinase domain profile. 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0515 500 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Alju04g0515 500 FunFam Calcium-dependent protein kinase 1 318 493 - -
Alju04g0515 500 SUPERFAMILY Protein kinase-like (PK-like) 52 318 IPR011009 -
Alju04g0515 500 SUPERFAMILY EF-hand 349 489 IPR011992 -
Alju04g0515 500 Pfam EF-hand domain pair 428 490 IPR002048 GO:0005509
Alju04g0515 500 Pfam EF-hand domain pair 358 418 IPR002048 GO:0005509
Alju04g0515 500 SMART serkin_6 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0515 500 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Alju04g0515 500 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Alju04g0515 500 SMART efh_1 357 385 IPR002048 GO:0005509
Alju04g0515 500 SMART efh_1 464 492 IPR002048 GO:0005509
Alju04g0515 500 SMART efh_1 393 421 IPR002048 GO:0005509
Alju04g0515 500 SMART efh_1 429 457 IPR002048 GO:0005509
Alju04g0515 500 FunFam Calcium-dependent protein kinase 1 54 137 - -
Alju04g0515 500 FunFam calcium-dependent protein kinase 1 138 317 - -
Alju04g0515 500 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 485 - -
Alju04g0515 500 CDD EFh_PI-PLC 358 491 - -
Alju04g0515 500 ProSitePatterns Protein kinases ATP-binding region signature. 58 85 IPR017441 GO:0005524
Alju04g0515 500 ProSiteProfiles EF-hand calcium-binding domain profile. 461 495 IPR002048 GO:0005509
Alju04g0515 500 MobiDBLite consensus disorder prediction 1 34 - -
Alju04g0515 500 ProSitePatterns EF-hand calcium-binding domain. 366 378 IPR018247 -
Alju04g0515 500 Pfam Protein kinase domain 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0515 500 ProSiteProfiles EF-hand calcium-binding domain profile. 353 388 IPR002048 GO:0005509
Alju04g0515 500 CDD STKc_CAMK 51 309 - -
Alju04g0515 500 CDD EFh 432 490 IPR002048 GO:0005509
Alju04g0515 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Alju04g0515 500 Gene3D Phosphorylase Kinase; domain 1 54 137 - -
Alju04g0515 500 Gene3D - 318 496 - -
Alju04g0515 500 Gene3D Transferase(Phosphotransferase) domain 1 138 317 - -
Alju04g0515 500 ProSitePatterns EF-hand calcium-binding domain. 402 414 IPR018247 -
Alju04g0515 500 MobiDBLite consensus disorder prediction 20 34 - -
Alju04g0515 500 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0515 Alju-ChrAlju04 5245675 5249564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0515 10 500 EF-hand Containing Proteins AT4G04720 80.162 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju04g0515 Pkinase 1.7e-73 CL0016