Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0505 ATGGATGGCGATGACCCTCCTTGCCCATCACCGTATGTTTCGTCATCTTCGATTTTCAAGGACATTTCCAATTTCAAAACTCCCAAACGTCCCTCTTATAGCTTCCAATCCCCTTGTGAGAAGTTCTTCACAGCCTCCAGGAAAACACCACACTCCTCAGCATTCCGTCGCCGGCCATCTATCGCTCCCCCATCTTCTGCTCGAACCAAGAAGTCTGCGGCTGTGGCCAGGAAACTCAAGGCGTTTGAACTTGAGCAGTCCCAATCCTCGAGAAAAGCTCAACTAAAGAAAGAACAGTCTCTGAAATCTCTTGCCAAGTCTGTCACTGTTTGGCTTAATTTTTTGTTCGAAAACCCTGCTACGTGCGGATGTAACTTGTCCATCGGAGGAATTCAGATGGGGGATAAACAATCTGAAGCGGAGGCGACGAAGGGAAAGAGGGATAGCGGTCCTGGGATTTCCATCGGGGTTGATAAAGCCTGGCGCACTCCGAAGAGGCAGAGGAAGATGTGGTCTCGGGCAGAGGAGCGTGTTGGTAATGAAAATGCGCTCTTGGAATTGCCAAATTCCATGTTTCCGTACTTGAGGGAATCTCTGGAGGATGTCTGCAGTTTTGAAGATTTGAAGCAGCGAATGAGAGTTTATCTGAACTTGGGAAGTTGTAAAGAGATTTTTCAAGTTATGAATCAAGTCACCAAGAATATTGATGAAGGAAGGTTAAAGTTGAAGCCACATTGCCCCATAGTAACAGATCTCGGATTGAAAAATAAAGCCACAAGAATCCTTATGTGTTATAATCCAATTTGGCTCCGGATTGGATTATATATAATTTTTGGTGGTGACTCCTTGGTGCCCAACGGGGATGATGACTCTGAACAAGAAATCACATTTTTGAAAATGGTTATTGAGAAGCAATTTTTCTCACATGCGGGTTTGGCAAAAGCATATGCTTATAACAAGATGGTTGACGGCCTATACAGACCAGGGTATTATGAGAATTTGGGGAATGTGATTTTAAAGAGAATTTTATTGCTTGTGCTCACACTGGATAGAATTAAATCTCAGAGCAGCTTGTCACTTAAGTATGGCATCGATGGATTGGATGGTGGTTCCCCTTTGTTGTTCAAAGCAGATTCTTGGATTAAATCAAGTGGTCAAGTCATCAGTGAATTCCTATCGTCAGAGGTAATGCACGGAGAAGGAAATCTTCTGGCTCATTTAGTGATAATAGGTTACAAAGTATCTCACCAACAGGGGCCACTTGTCGAGTATGATTTCAAGGTCAGAGATTTATTTGTAGATCTCCAAGATGGAGTAAAGCTCTGTAGAGCTATACAGCTCTTGCAGCATGATTCTTCTATCCTCACGAAAATTGTAGTTCCCTCAGATACTTATAAGAAGAATTTGGCCAACTGTGGCCTTGCCCTACAATACCTTAAGCAAGCTGGTGTGTTGCTACATGATGAGGATAACATGATGATTGTAGCGGAGGATGTTGCCAATGGAGACAAAGAACTTGTTCTCTCGTTGCTGTGGAATATCTTTGTTCACTTGCAGCTACCTCTTCTGGTTGACAAATCAAATATACTAGAGGAAATCGGTAAAATTCGTGGACTTGGTGTGGATGCCATTAACAATGCAAATTCTAGTTCATTGGAATTGCTTTTGACTTGGATTCAGGCAGTTTGTGAAAATTATGATTGTGGGATTGACAATTTTGATTCATTAGTTGATGGAAAAGCTATCTGGTGCTTACTTGATTATTATTTCCAGAAAGAACTTCATAGTTCCTGCATACTGAAGGAAGTCAATACGAAAAGTGGCAAGGAATCAATAATGTCTGTCAATGATTATTCAGATGCAGTGTACAATTTTATATTATCACAGAGGTTGACAACATTATTAGGGAATTTTCCGGAGGTACTTCAAATAAGCGACCTACTTGAATGTAATGGTGCTTCCAGTGATCGAAGCGTAGTGATATTGTTGGTTTTCCTTGCAAGGCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTTCATAAGCTCCTTGGTTGTGATTGCCAAAGTCTGTACCGGAAACATTTGAGGATGGAGCAGTGTAATTCTAATTCTGGAGCAGTAGAAAAGCCGGACGCTTCTGATGTGCATGACAACGAAGATGCTGCAAGAAAATTCAAGGCCATCCAAGCTTGGTGGCAAGATATGGCTGAAAGAAATCAGAAATCTTGCATGAAACCGGCTGCGTGCAGACCCGTGGAAAGCAGCAACAACATCAGAAGAGAAACCGCTGCAATAACAATACAATCACATTTCAGAAGATTGGTTGCTCGTCGCATGTTTCTCAAAATGAATAATGATGTCTCTCTTTTGCAAACTGTTTTCCGAGCTTGGCTAGAAGTGAGGCAGGAGTCTTGGTTCACCTTTGTCCAAGGGCAAAATTTTTCATGCGAAATACGCAAGAGGTCAGGAACATATAGGAGATATGCCATATTTTTCGTTCAAAGGCGCTCTTTTTTGAAGTTAAAGAGGTCCGCATTACTTATCCAGCAAGCAATGAGGAGTTGGCTCGCTCGGAGGCATCAGCAGGGATGTGGTATACTTCCTTCCGTGACGGCTTCAGATCCAGTGGCTGCTGCCGCTATTGGTCAGAAATTTGTTCGTGGTTGGATGGCACGATCTGGATATAATCATATGCTTGTTCAGCAAGAGGAAGCTTCATATTTGTACTCACAAAAGGTTATGTTTGAACTTCAAACAAAAGCTGCCATCAGGATGCAGCTTGCTTGGAAGAGGCATATGTGCTGCAAGTCTACTCAGAGGCGCTTCTATGCGACAATAATTCAAAGCAATTTTCGTAGGTGGCGGTTAAGAAGAATATATTTGAATCAGATTCAAGCTGTTTTGAGAATCCAATGTTATTTCCGAATGTCAGTTAGTGTAAAGACTTTTCAACACTTGAAAACGGCATTTAAGGCAGCTATTGTCATTCAGTCTTTCACACGTGCATGGATTGCACAGAAGGAAGCTTATGCACATAGAAGTCGCATCCTTTCAATTCAAAGGCATTGCCGCACTTGGCTGGCGAGAAGGGACTTTATATGCCAAAGAGGCGCTGCATTGAAGATTCAAAGCGTCATTCTTAGTCTGAAATACCAGAAGGCTCTCAATTGTCAGAAAGATGCAGTTTTGCAGATTCAGCGTTTTATTAGAGGGCATTTATCACGAAATAGGCTCTTAGGAGGTGCATCTCGGCAACGCGCAATGATTCCAAGGGGTTGCGTTTTAAGACCAGTTGGTTACTCTAGTTTTCAACTGGAACTATTTTTGTGTTCTGTTCTGAAATTGCAGCGATGGTGGAAGGGGGTCTTGTTACACAAGTTAAGAACAAAGTCTGTGATTATAATCCAATCTTGTACTCGTGGGTGGATTGCTAGGCGAATGGCAACTGTTCGCAGACACCATGTTGTTGTTATTCAAAGGCATTGCCGCACTTGGTTGGCGAGAAGGGACTTCATGCGCCAAAGAGGCGCAGCAATGAAGATCCAAAGCGTCATTCTTAGCCTGAAATACCAGAAGGTTCTCAATTGTCAGAAAGATGCAGTATTGCAGATTCAGCGTTTTATTAGGGGGCATTTATCACGAAATAGGCTTTTAGGGGGTGCATCTGGGCAACGCGCAATGATTCCAAGTGGTTGCATTTTAAGATCAGCTGGTTTCTCTAGTTTTCAACTGGAACTATTTTTGTGTTCTGTTCTGAAATTGCAGCGATGGTGGAAAGGTGTCTTGTCACACAAGTTAAGAACAAAGTCTGTGATTATAATTCAGTCTTGTACTCGTGGGTGGATTGCTAGGCGAAAGGCAACTCTTAGCAGGCATCATGTTGTGGTCATTCAATCCCACTGGAAAGGTTACCTTGCTCGGAAAGAGTCAAAAGAGCAGCTGCGAGACTTGCGCCTGAGAGTGAAGAAATCTGCCAGAAATGTGGACGATAGCAAGCGTCTCATAAACAGACTTCTTGTCGCGCTTTCAGAGCTACTTCACATGAAGAGTGTCAGTGGCATCCTTCACACTTGTGCGACATTGGATATGGCTACAGAACATTCTCAGAGATGTTGTGAAGAACTCGTCGCTGCAGGGGCTATTGACAAGTTGCTGACGCTTATTCGTTCAGTGAGCCGAAGCATACCTGATCAGGAGGTTCTTAAGCATGCTCTGTCAACTCTCCGAAATCTAGCCCGCTACTCTCACCTACTTGAATTGCTGATTCAAAGCAACGGTTCTATACAGACGATTCTCTGGGAATTACTGAGGAATAAGGAGGACAGTTACTTTATAGCTTCTGATCTTCTGATGAAGATATCTTCAACTCCTAAAGGTGTTGAATCCTTACGCAAGTTACCTGCTCTTGTAAAAAGACTGCATGCTCTTGTTGAGGAGCTTACACGGAAGGCAATCTATGAGAAAAGAAATGGCAGAGCTGCTAGTGCAGTAATAAGAGAGAATAGAGAGAGGAGATTGAAGGAGGCTGCTGGGATTCTCAAACTGATAACAAGTGCCTGA 4566 0.4273 MDGDDPPCPSPYVSSSSIFKDISNFKTPKRPSYSFQSPCEKFFTASRKTPHSSAFRRRPSIAPPSSARTKKSAAVARKLKAFELEQSQSSRKAQLKKEQSLKSLAKSVTVWLNFLFENPATCGCNLSIGGIQMGDKQSEAEATKGKRDSGPGISIGVDKAWRTPKRQRKMWSRAEERVGNENALLELPNSMFPYLRESLEDVCSFEDLKQRMRVYLNLGSCKEIFQVMNQVTKNIDEGRLKLKPHCPIVTDLGLKNKATRILMCYNPIWLRIGLYIIFGGDSLVPNGDDDSEQEITFLKMVIEKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLLVLTLDRIKSQSSLSLKYGIDGLDGGSPLLFKADSWIKSSGQVISEFLSSEVMHGEGNLLAHLVIIGYKVSHQQGPLVEYDFKVRDLFVDLQDGVKLCRAIQLLQHDSSILTKIVVPSDTYKKNLANCGLALQYLKQAGVLLHDEDNMMIVAEDVANGDKELVLSLLWNIFVHLQLPLLVDKSNILEEIGKIRGLGVDAINNANSSSLELLLTWIQAVCENYDCGIDNFDSLVDGKAIWCLLDYYFQKELHSSCILKEVNTKSGKESIMSVNDYSDAVYNFILSQRLTTLLGNFPEVLQISDLLECNGASSDRSVVILLVFLARQLFVKKNVDQLNFHKLLGCDCQSLYRKHLRMEQCNSNSGAVEKPDASDVHDNEDAARKFKAIQAWWQDMAERNQKSCMKPAACRPVESSNNIRRETAAITIQSHFRRLVARRMFLKMNNDVSLLQTVFRAWLEVRQESWFTFVQGQNFSCEIRKRSGTYRRYAIFFVQRRSFLKLKRSALLIQQAMRSWLARRHQQGCGILPSVTASDPVAAAAIGQKFVRGWMARSGYNHMLVQQEEASYLYSQKVMFELQTKAAIRMQLAWKRHMCCKSTQRRFYATIIQSNFRRWRLRRIYLNQIQAVLRIQCYFRMSVSVKTFQHLKTAFKAAIVIQSFTRAWIAQKEAYAHRSRILSIQRHCRTWLARRDFICQRGAALKIQSVILSLKYQKALNCQKDAVLQIQRFIRGHLSRNRLLGGASRQRAMIPRGCVLRPVGYSSFQLELFLCSVLKLQRWWKGVLLHKLRTKSVIIIQSCTRGWIARRMATVRRHHVVVIQRHCRTWLARRDFMRQRGAAMKIQSVILSLKYQKVLNCQKDAVLQIQRFIRGHLSRNRLLGGASGQRAMIPSGCILRSAGFSSFQLELFLCSVLKLQRWWKGVLSHKLRTKSVIIIQSCTRGWIARRKATLSRHHVVVIQSHWKGYLARKESKEQLRDLRLRVKKSARNVDDSKRLINRLLVALSELLHMKSVSGILHTCATLDMATEHSQRCCEELVAAGAIDKLLTLIRSVSRSIPDQEVLKHALSTLRNLARYSHLLELLIQSNGSIQTILWELLRNKEDSYFIASDLLMKISSTPKGVESLRKLPALVKRLHALVEELTRKAIYEKRNGRAASAVIRENRERRLKEAAGILKLITSA 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 1269 1296 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 765 780 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 993 1010 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 1201 1219 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 1131 1148 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 1157 1173 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 1062 1080 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 1270 1288 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 946 962 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 1017 1034 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 1296 1311 IPR000048 GO:0005515
Alju04g0505 1521 Pfam IQ calmodulin-binding motif 845 862 IPR000048 GO:0005515
Alju04g0505 1521 SMART arm_5 1370 1415 IPR000225 GO:0005515
Alju04g0505 1521 SUPERFAMILY Calponin-homology domain, CH-domain 324 601 IPR036872 -
Alju04g0505 1521 Gene3D - 546 672 IPR036872 -
Alju04g0505 1521 CDD CH_ASPM_rpt1 403 514 - -
Alju04g0505 1521 Coils Coil 1309 1329 - -
Alju04g0505 1521 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1381 1428 IPR000225 GO:0005515
Alju04g0505 1521 MobiDBLite consensus disorder prediction 45 70 - -
Alju04g0505 1521 Gene3D - 1318 1520 IPR011989 -
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 1199 1228 IPR000048 GO:0005515
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 879 906 IPR000048 GO:0005515
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 1060 1089 IPR000048 GO:0005515
Alju04g0505 1521 Gene3D - 413 519 IPR036872 -
Alju04g0505 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1315 IPR027417 -
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 1130 1157 IPR000048 GO:0005515
Alju04g0505 1521 PANTHER UNCHARACTERIZED 37 864 - -
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 1153 1182 IPR000048 GO:0005515
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 762 790 IPR000048 GO:0005515
Alju04g0505 1521 Pfam Calponin homology (CH) domain 427 518 IPR001715 GO:0005515
Alju04g0505 1521 SUPERFAMILY ARM repeat 1338 1481 IPR016024 -
Alju04g0505 1521 ProSiteProfiles Calponin homology (CH) domain profile. 397 519 IPR001715 GO:0005515
Alju04g0505 1521 SMART iq_5 876 898 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 1291 1313 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 1129 1151 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 1013 1035 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 990 1012 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 1059 1081 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 1198 1220 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 941 963 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 1268 1290 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 761 783 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 842 864 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 1152 1174 IPR000048 GO:0005515
Alju04g0505 1521 SMART iq_5 964 986 IPR000048 GO:0005515
Alju04g0505 1521 Pfam Armadillo/beta-catenin-like repeat 1371 1415 IPR000225 GO:0005515
Alju04g0505 1521 ProSiteProfiles IQ motif profile. 1292 1320 IPR000048 GO:0005515
Alju04g0505 1521 Gene3D - 761 807 - -
Alju04g0505 1521 Gene3D - 1128 1178 - -
Alju04g0505 1521 Gene3D - 1268 1317 - -
Alju04g0505 1521 Gene3D - 941 992 - -
Alju04g0505 1521 Gene3D - 1036 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0505 Alju-ChrAlju04 5167686 5176885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0505 1132 1327 Myosins gene family AT5G43900 24.747 2.05e-06 50.8