Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0498 ATGGATTGTTTCCCATGTTGCAACAATAAGCATGAACTTGAAACGGTTCCTTTGAGCAGAAATTCCATTGATTATGCACCTTCCAGGAAATCCACTTTCAGATCTTTTCTTAGGGCTCTCTCTTCCAAAACAGGTAGCAGCAGACAAAGACACATTGCAGCTGAGATAAGAAAATATGGAACAGCGAAGAACAATGTGCGAATCTTCACAGTTCAAGAACTGGTCTCTGCAACTGACAACTTCAGTCCTGACCGTTTGATCGGTGAAGGTGGTTTTGGCAGTGTCTACAAAGGATACTTACAAAGCATTGATCAAGCTGTGGCTGTGAAGCGACTGGACAGGAATAGATTGCAAGGAAGTAGAGAATTCTTTTCAGAAGTCATAACGTTGAGTTTGGTAAAGCACCCCAACCTCGTCAAGCTCATAGGTTATTGTGTCGAAGGAGATCAAAAGATGTTGGTTTATGAATTGATGGTCAACGGCAGCCTCGAAAGTCACCTTCTAGATTTAGAAGACAAGGAGGGACTGGATTGGGAAACAAGGATGAAAATAGCAGAAGGAGCAGCGAGAGGATTAGAGTATCTGCATGAAGAAGCAGATCCACCCATAATATACAGAGACTTGAAGGCATCCAACATACTTTTAGATGAGAACTTCAATGCCAAGCTATCAGATTTTGGGCTGGCCAAAATAGGGCCCACAGAAGAAGGAAAGGACCATGTGTCCACCAGGGTGATGGGCACTTTTGGGTATTGTTCACCTGAGTATGCTTTGACGGGTCGGGTTACTACTAAATCTGATGTTTATAGTTTTGGAGTTGTTTTAATGGAGATTATCACCGGAAGAAGAGTCTATGATACTTCTAGAGAAGAAGAAGAGCAAAACCTTATTGACTGGGCACAACCATTGCTAGAGGACAGAGAGAAGTTCACACTAATGGCAGATCCATTGTTAAAGGATAAGTTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGGAAGAAGAAGCAGACACAAGACCTTTAATGAGTGATGTAGTAACAGCGCTTCAGCACATTATAATCCCAGTAAAAAATAATGGTGAATTAAACGAAGGAGAATCTGTAAAAATTGCAGGCCATGTTGAATCATTTAGGATAGGAAGCTCACGTGTAGACAACAACAACAATAATCTACAACATCAACAAACAAGAATTGCAAGTTCAAGTGTGGGCCATCAGCAATTGTAG 1245 0.4193 MDCFPCCNNKHELETVPLSRNSIDYAPSRKSTFRSFLRALSSKTGSSRQRHIAAEIRKYGTAKNNVRIFTVQELVSATDNFSPDRLIGEGGFGSVYKGYLQSIDQAVAVKRLDRNRLQGSREFFSEVITLSLVKHPNLVKLIGYCVEGDQKMLVYELMVNGSLESHLLDLEDKEGLDWETRMKIAEGAARGLEYLHEEADPPIIYRDLKASNILLDENFNAKLSDFGLAKIGPTEEGKDHVSTRVMGTFGYCSPEYALTGRVTTKSDVYSFGVVLMEIITGRRVYDTSREEEEQNLIDWAQPLLEDREKFTLMADPLLKDKFPVKGLFKALAVAAMCLEEEADTRPLMSDVVTALQHIIIPVKNNGELNEGESVKIAGHVESFRIGSSRVDNNNNNLQHQQTRIASSSVGHQQL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0498 414 SMART serkin_6 81 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0498 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Alju04g0498 414 PANTHER OS07G0668900 PROTEIN 3 360 - -
Alju04g0498 414 Pfam Protein kinase domain 84 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0498 414 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Alju04g0498 414 Gene3D Transferase(Phosphotransferase) domain 1 158 376 - -
Alju04g0498 414 ProSiteProfiles Protein kinase domain profile. 81 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0498 414 CDD STKc_IRAK 87 358 - -
Alju04g0498 414 SUPERFAMILY Protein kinase-like (PK-like) 65 359 IPR011009 -
Alju04g0498 414 FunFam Serine/threonine-protein kinase PBS1 158 372 - -
Alju04g0498 414 Gene3D Phosphorylase Kinase; domain 1 41 157 - -
Alju04g0498 414 MobiDBLite consensus disorder prediction 387 414 - -
Alju04g0498 414 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 54 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0498 Alju-ChrAlju04 5132195 5135944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0498 1 355 Glycoside Hydrolase AT3G07070 56.461 2.48e-134 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju04g0498 Pkinase 1.6e-46 CL0016