Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0473 ATGGCTTCTTCCCACCAGTCCCTTCTTGACAAACCCAAAAAATCAATTTCCAGAAATATTTGGCTTCTTCTCTCTCTAGCTGCCCTCATAGGCTTCTCAGCCCTTGTTGCTTCTTATCTCTTCTCTCCCTCCTCCTCCTCCTTCTTCAACCTCAATCATCACCATCATCTCTGTGATCATGCCCTTCACAAATCATCATGCCTTGATCATCTCTCTGAACTAACTCAAGCTTCAACCTTTACCACCACCAACAACGAAGACCAAAACTCCAAATTGCTTCAATCCTTCCTCATCAAAACCACCTCACAAATCCAGAAAACTGTGGACTCAACCAAAGCCATCAAATACAGAATCAATGATCCCAAACTGCAGCAAGCTTTGCTTGTCTGTGAGCAACTTCTGGACTTGTCCCTTGATAGAGTTTGGGATTCAATGGTGGCTCTCACAGAAAAGACCACCAAATCCTACCAAGATGCTCACACATGGCTCAGCACTGTCCTCACTAACCACATCACTTGCCTTGATGAGTTAGAAGGATCAGCTCGAGCACTTATAGAATCTGAGCTCAATGACTTAGTCTCCAGAGCCAGAACCTCTCTAGCCATGCTTGTTCATGTTATGCCCTCTAAAATTGATGTCGTTGATGAGCCACTTAATGGTGAGTTTCCCTCATGGGTAACGAGTAAGGACAGGAAGCTTCTGGAAGCTTCTGCTAACGATATAAAGGCGAACGTTGTGGTGGCTAAGGATGGAAGCGGGAGGTTTAAGACTGTGAACGAAGCTGTGGCTTCGGCACCAGATAATAGTAAGACAAGGTATGTGATATATGTGAAGAATGGAGTTTATAAAGAGAATGTGGAGATTGGATCCAAGAAGAAGAACGTGATGCTGGTGGGTGATGGTATGGATGCGACAATCATCACCGGAAGTTTGAATTTCGTCGATGGAACACCCACCTTTAAAACGGCCACCGTCGCTGCTGTTGGGGATGGGTTCATAGGGCAAGACATATGGTTCCAAAACACGGCAGGCCCTCAGAAGCACCAAGCGGTGGCTCTCCGCGTCGGCGCCGATCTCTCCGTCATCAACCGCTGCCGTGTGGACGCTTACCAAGACACTCTATACGCCCACACCAACCGGCAATTCTACCGGGACTCCTTCATCACCGGCACCGTCGACTTCATCTTCGGCAACGCCGCGGTTGTGTTCCAAAAGTCCAACCTTGTGGCCCGAAAGCCCTTGAATAACCAGAACAACATGGTCACAGCTCAAGGACGCGAAGACCCAAACCAAAACACAGGCACTTCAATCCAGCAATGTAACCTAACACCAAGCTCCGATCTCAAGCCAGTCATAGGCTCAATCAAAACCTTTCTGGGTCGTCCATGGAAGGAATATTCTAGAACTGTTGTGATGCAATCATTTTTGGATAGCCATATTGATCCAGCAGGATGGGCTCCATGGGACGATAAGCAATCGACTCTGAAGAATTTGTATTATGGAGAGTACATGAACAATGGACCTGGTTCTGGTGTTGCCAAGAGAGTGAACTGGCTTGGTTATCATGTGATTACAAGTGCTTCTGAAGCAAGCAAGTTCACGGTGGCTCAGCTCATTCAAGGTGGCACTTGGCTTAAGAACACCGGCGTCGCCTTCATTGAAGGGCTCTAG 1671 0.4746 MASSHQSLLDKPKKSISRNIWLLLSLAALIGFSALVASYLFSPSSSSFFNLNHHHHLCDHALHKSSCLDHLSELTQASTFTTTNNEDQNSKLLQSFLIKTTSQIQKTVDSTKAIKYRINDPKLQQALLVCEQLLDLSLDRVWDSMVALTEKTTKSYQDAHTWLSTVLTNHITCLDELEGSARALIESELNDLVSRARTSLAMLVHVMPSKIDVVDEPLNGEFPSWVTSKDRKLLEASANDIKANVVVAKDGSGRFKTVNEAVASAPDNSKTRYVIYVKNGVYKENVEIGSKKKNVMLVGDGMDATIITGSLNFVDGTPTFKTATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVDAYQDTLYAHTNRQFYRDSFITGTVDFIFGNAAVVFQKSNLVARKPLNNQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVIGSIKTFLGRPWKEYSRTVVMQSFLDSHIDPAGWAPWDDKQSTLKNLYYGEYMNNGPGSGVAKRVNWLGYHVITSASEASKFTVAQLIQGGTWLKNTGVAFIEGL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0473 556 Pfam Plant invertase/pectin methylesterase inhibitor 55 195 IPR006501 GO:0004857
Alju04g0473 556 CDD PMEI-like_4 65 204 - -
Alju04g0473 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 206 IPR035513 -
Alju04g0473 556 PANTHER PECTINESTERASE 35 546 - -
Alju04g0473 556 FunFam Pectinesterase 238 556 - -
Alju04g0473 556 ProSitePatterns Pectinesterase signature 2. 388 397 IPR033131 -
Alju04g0473 556 Pfam Pectinesterase 244 541 IPR000070 GO:0030599|GO:0042545
Alju04g0473 556 ProSitePatterns Pectinesterase signature 1. 269 288 IPR018040 -
Alju04g0473 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 202 IPR035513 -
Alju04g0473 556 SUPERFAMILY Pectin lyase-like 242 555 IPR011050 -
Alju04g0473 556 SMART PMEI_2 44 202 IPR006501 GO:0004857
Alju04g0473 556 NCBIfam pectinesterase inhibitor domain 30 182 IPR006501 GO:0004857
Alju04g0473 556 Gene3D - 238 556 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0473 Alju-ChrAlju04 4893282 4895713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0473 1 556 Carbohydrate Esterase AT1G11580 56.206 0.0 621