Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0472 ATGTACTCGTCTCGCTTTGATGAGGTTTCAGTCTCAAGTCTGGGTCCACATCATACAAACAAAAACACAACACTGCAATCATCTTCTTCCTCTTACACTATGGCTTCTCCCAACCAGTCCCTTCTTGACAAACCCAAAAAATCAATTTCCAAAACCATCTGGCTTCTTCTCTCTCTATCTGCTCTCTTCAGCTCTGCTCTTTTTGCTTCTTATCTCTTCTCACCCACCTCCTTCATCTTCAACCTCTCTCACCCTCATCACCATCTCTGTGATCATACCCTTCACAAATCATCATGCCTTGCCCACCTCTCTGAACTAACTCAATCTTCAACCTTTACTACCTCCAACGACCTAAACTCCAAATTGCTTCACTCTCTCCTCACCAAAACCACCTCACAAATCCAAAAGACTTTGGACTCAACCAAAGCCATCAAATACAGAATCAATGATCCCAAACAGCAGCAAGCTTTGCTTGTCTGTGAGCAACTTCTGGACTTGTCCCTTGATAGAGTTTGGGATTCAATGGTGGCTCTCACAGAAAAGACCACCAAATCCTACCAAGATGCTCACACATGGCTCAGCACTGTCCTCACTAATCACATCACTTGCCTTGATGAGTTAGAAGGATCAGCTCGAGCCCTTACAGAATCTGAGCTCAATGACTTGGTCTCCAGAGCCAGAACCTCCCTAGCCTTGCTTGTTCATGTTATGCCCTCTCAAATTGATGTCGTTGATGAGCCACTTAATGGTGAGTTTCCCTCATGGGTGACGAGTAAGGATAGGAAGCTTCTGGAAGCTTCTGCTAATGATATAAAGGCGAACGTTGTGGTGGCTAAGGATGGAAGTGGGAGGTTTAAGACTGTGAACGAAGCTGTGGCTTCCGCACCAGATAACAGTAACACGAGGTATGTGATATATGTGAAGAAGGGAGTTTATAAAGAGAATGTTGAGATCGGATCGAAGAAGAAGAATGTGATGCTGGTGGGTGATGGTAAAGATGCGACGATCATCACCGGAAGTTTGAATGCCGTCGATGGAACACCCACCTTCAGAAGTGCCACCCTCGCTGCTGTTGGGGATGGATTCATAGCCCAAGACATAGGGTTCCAGAACACGGCGGGCCCTCAGAAGCACCAAGCGGTGGCTCTCCGCGTCAATGCTGATCTCGCCGTCATCAACCGCTGCCGTATGGACGCCTTCCAAGACACTCTATACACCCACTCCAACCGGCAATTCTACAGGGACTCCTTCGTCACCGGCACCGTCGACTTCATCTTTGGCAACGCCGCGGTGGTGTTCCAAAAGTGCGACCTCGTAGCCCGTAAGCCCATGAATGGTCAGAACAACATGGTCACAGCCCAAGGACGCGAAGACCCAAACCAGAACACAGGAACTTCAATCCAACAATGTAACTTAACACCAAGCTCCGATCTCAAGCCCGTCGTGGGTCAAGTGAAAACCTTTTTGGGTCGTCCATGGAAGGAATACTCTCGAACTGTGGTGATGCAGTCACTTCTGGATAGCCATATTGATCCAACAGGGTGGGCTCCATGGGACACTAAGCAATCTACACTGAAGAATTTGTATTATGGAGAGTACATGAACAAAGGAGCTGGTGCTGGGACTGGCAAGAGAGTGAAATGGCCTGGGTATCGTGTGATTACAAGTGCTTCTGAGGCGAGCAAGTTCACGGTGGCTCAGCTCATTCAAGGTGGCACTTGGCTTAAGAACACTGGCGTCGCCTTCATTGAAGGGCTCTAG 1761 0.4821 MYSSRFDEVSVSSLGPHHTNKNTTLQSSSSSYTMASPNQSLLDKPKKSISKTIWLLLSLSALFSSALFASYLFSPTSFIFNLSHPHHHLCDHTLHKSSCLAHLSELTQSSTFTTSNDLNSKLLHSLLTKTTSQIQKTLDSTKAIKYRINDPKQQQALLVCEQLLDLSLDRVWDSMVALTEKTTKSYQDAHTWLSTVLTNHITCLDELEGSARALTESELNDLVSRARTSLALLVHVMPSQIDVVDEPLNGEFPSWVTSKDRKLLEASANDIKANVVVAKDGSGRFKTVNEAVASAPDNSNTRYVIYVKKGVYKENVEIGSKKKNVMLVGDGKDATIITGSLNAVDGTPTFRSATLAAVGDGFIAQDIGFQNTAGPQKHQAVALRVNADLAVINRCRMDAFQDTLYTHSNRQFYRDSFVTGTVDFIFGNAAVVFQKCDLVARKPMNGQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGQVKTFLGRPWKEYSRTVVMQSLLDSHIDPTGWAPWDTKQSTLKNLYYGEYMNKGAGAGTGKRVKWPGYRVITSASEASKFTVAQLIQGGTWLKNTGVAFIEGL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0472 586 NCBIfam pectinesterase inhibitor domain 87 212 IPR006501 GO:0004857
Alju04g0472 586 CDD PMEI-like_4 97 234 - -
Alju04g0472 586 Gene3D Invertase/pectin methylesterase inhibitor family protein 87 236 IPR035513 -
Alju04g0472 586 PANTHER PECTINESTERASE 71 576 - -
Alju04g0472 586 SMART PMEI_2 81 232 IPR006501 GO:0004857
Alju04g0472 586 FunFam Pectinesterase 268 586 - -
Alju04g0472 586 Pfam Pectinesterase 274 571 IPR000070 GO:0030599|GO:0042545
Alju04g0472 586 ProSitePatterns Pectinesterase signature 1. 299 318 IPR018040 -
Alju04g0472 586 Gene3D - 268 586 IPR012334 -
Alju04g0472 586 SUPERFAMILY Pectin lyase-like 272 585 IPR011050 -
Alju04g0472 586 MobiDBLite consensus disorder prediction 1 43 - -
Alju04g0472 586 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Alju04g0472 586 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 88 210 IPR035513 -
Alju04g0472 586 Pfam Plant invertase/pectin methylesterase inhibitor 88 216 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0472 Alju-ChrAlju04 4884088 4889491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0472 34 586 Carbohydrate Esterase AT1G11580 57.117 0.0 624