Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0439 ATGGCGCAGTGCACGTCGGATTTAAGTGGGGTTGATTGTCTCCACTGCCTGGATAAGAGTATTAACAATCTGCCTAGATGCTGTTATGGAGATGTGGGCGGAGTAACCCTCAAGCCAAGTTGCTATTTAAGGCACGAAACGTACGCCTTTTACCAGGAGGAAGAAGAGCCTCTGCCACCAACTCCTCCCAAAGATAAAAGCAAGATTTCGGCTGGGACAATTGTTGCCATAGTTGTCCATTCAGCGATATTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCGTTAAATATTGGAGAGCAAGAATGAACGCTTCACTTCCTAAAACTGCTGAAATGTCAAGTGCAGATGGCTACATGGCTCCTGAATATGCAATACATGGTCATATTTCAGTCAAATCTGATATATATAGTTTTGGCGTCCTAATCTTGGAGATCATTAGTGGCAAGAAGAATACATCTTTCTATGCATCAAATTATGCGGAAAACTTGCTAACCTATGCCTGGAAACTTATTGAGTCAAATGGGCGCATGCTTTCCTTCCAAGCTGGGGATTATGGAGGCTTATCATGCAAAAGTAATCAATGA 585 0.4291 MAQCTSDLSGVDCLHCLDKSINNLPRCCYGDVGGVTLKPSCYLRHETYAFYQEEEEPLPPTPPKDKSKISAGTIVAIVVHSAIFILQVSLCFLCVKYWRARMNASLPKTAEMSSADGYMAPEYAIHGHISVKSDIYSFGVLILEIISGKKNTSFYASNYAENLLTYAWKLIESNGRMLSFQAGDYGGLSCKSNQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0439 194 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 117 177 - -
Alju04g0439 194 Gene3D - 1 50 IPR038408 -
Alju04g0439 194 Gene3D Transferase(Phosphotransferase) domain 1 90 185 - -
Alju04g0439 194 Pfam Protein tyrosine and serine/threonine kinase 116 152 IPR001245 GO:0004672|GO:0006468
Alju04g0439 194 ProSiteProfiles Gnk2-homologous domain profile. 1 50 IPR002902 -
Alju04g0439 194 SUPERFAMILY Protein kinase-like (PK-like) 116 153 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0439 Alju-ChrAlju04 4544297 4547176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0439 1 53 Receptor kinase-like Gene Family AT4G23230 45.283 4.78e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0439 PK_Tyr_Ser-Thr 3.1e-07 CL0016