Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0434 ATGGGGTCAGTGGTTTCGTCGTCACTGCCTTCTCATCGTCCGCCACCGGAGCTAGAGGTCACTCCCAACGGTAAAAGAAAGATTTCGGTTGTGACAATTATTGCCATAGCAGTTCAATCAGCGATCCTCATATTGCAAGTCTCGCTCTGCCTCTTGTGCCTTAAATGGAGAGCAAGGATGAATGCTTCACTTCCTAAAAATGTTGAGATTTCAAGTGTAGAGTCTCTACATTTTGATTTGGATGCCATCAAATCAGCCACAAGGGACTTCTCCCCTGACAATAAACTAGGTCAAGGTGGATATGGCGAGGTGTACAAGGGTATTTTACCTAATGGACAAGAGTTAGCTGTAAAGAGGCTATCAAGTAGTTCCAAACAAGGTGTGCCAGAATTTAAGAATGAAGTAGTAACAATGGCAAAACTACAACATAGAAATCTTGCAAGGTTTCTTGGATTTTGTTTGGAAGAAGAAGAAAAGATACTGGTATATGAATATTTGCCCAACAAAAGCTTGGATAATTTTTTGTTTGGACCTGAAAACAAAGGTAAATTGAATTGGTCAAATAGATTCAACATTATTGAAGGCGTTGCAAGGGGGATAACTTATCTTCATGAAGATTCTCAACTCAAAATCATACATCGTGATCTCAAATCTAGTAATATTTTGTTGGATGAAGATTTGAATCCAAAAATATCTGATTTTGGTATGGCTAGAATTTTTGGAGTCGATCAAACTCAAGCCAATACAAGTAAAGTTGTTGGGACATTTGGCTACATGTCTCCTGAATATGCAATGCATGGTCATATCACAGTCAAAACTGATATATATAGTTTTGGTGTCCTAATCCTGGAGATCATTAGTGGCAAGAGGAATACATCTTGCTATGCATCAAATTATGCTGAGAACTTGCTAACCTTTGCCTGGAAGCTGTGGAGGGAAGGGACGCCATTAGAATTGCTGGATCCTAGTCTAAGAAATTCTTGTTCAGGAAATGAAGTTATTAAATGCATCCATATAAGCTTGTTGTGTATCCAGGAAAATCCAGCTTTAAGGCCAACAATACAATCTATTATGGTGATGCTAAGTAGTCACTCCATCACGTTGGAAGATCCTCAAGAGCCAGCATTTTTGTTTATTGATCGCCAAAGAACAGATGCAAACAATCGAGCAATATTTTCTGAGAATAGCTCGGATCAATCTACAAGCAGGTCTATGCAAAGGTCTGTGGATGGAGATCCAATTTCTGACTTGTTTCCTCGTTAG 1263 0.3911 MGSVVSSSLPSHRPPPELEVTPNGKRKISVVTIIAIAVQSAILILQVSLCLLCLKWRARMNASLPKNVEISSVESLHFDLDAIKSATRDFSPDNKLGQGGYGEVYKGILPNGQELAVKRLSSSSKQGVPEFKNEVVTMAKLQHRNLARFLGFCLEEEEKILVYEYLPNKSLDNFLFGPENKGKLNWSNRFNIIEGVARGITYLHEDSQLKIIHRDLKSSNILLDEDLNPKISDFGMARIFGVDQTQANTSKVVGTFGYMSPEYAMHGHITVKTDIYSFGVLILEIISGKRNTSCYASNYAENLLTFAWKLWREGTPLELLDPSLRNSCSGNEVIKCIHISLLCIQENPALRPTIQSIMVMLSSHSITLEDPQEPAFLFIDRQRTDANNRAIFSENSSDQSTSRSMQRSVDGDPISDLFPR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0434 420 Gene3D Phosphorylase Kinase; domain 1 52 165 - -
Alju04g0434 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Alju04g0434 420 FunFam Cysteine-rich receptor-like protein kinase 10 55 165 - -
Alju04g0434 420 CDD STKc_IRAK 96 361 - -
Alju04g0434 420 Pfam Protein kinase domain 93 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0434 420 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Alju04g0434 420 ProSiteProfiles Protein kinase domain profile. 90 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0434 420 MobiDBLite consensus disorder prediction 1 21 - -
Alju04g0434 420 SUPERFAMILY Protein kinase-like (PK-like) 75 396 IPR011009 -
Alju04g0434 420 MobiDBLite consensus disorder prediction 390 409 - -
Alju04g0434 420 MobiDBLite consensus disorder prediction 390 420 - -
Alju04g0434 420 Gene3D Transferase(Phosphotransferase) domain 1 166 375 - -
Alju04g0434 420 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 403 - -
Alju04g0434 420 FunFam cysteine-rich receptor-like protein kinase 10 166 368 - -
Alju04g0434 420 SMART serkin_6 90 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0434 Alju-ChrAlju04 4492789 4496590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0434 24 420 Receptor kinase-like Gene Family AT4G05200 53.634 8.15e-150 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0434 Pkinase 1e-46 CL0016