Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0430 ATGCCCGTTGCCGCAGTTTACCCGGCCATAAGCATATGTGGTGATAACACATCACCATGCGGGGGAGGTCCATCCCTTTCAGGGGTCAGTGATCAAATTTATAGTGTAGCAAATGAGACGTTGAATGATGCCGTGGCGGAGGCAGCCACATCGAGAGGTACCAAGAAATTTGCAATAAAAGAAGCAAACTTGAGTATTTCCGAATTGATGTACACTCTTGTACAGTGCGTGCCTGATCTGTCCCCACAATTCTGTAGTCACTGTCTATATGCCATCATCAAACTTATTCCAAAAGAAAATCTTGTACCCCATGGAAGAATTCAGAATCCGAGCTGCAATTTGAGATTCGGAGTAGACCGATTTTATTATAAGGGCAACCTGCCTCCCTCCAGTAGTTATACCACTCAAGAGTTTGGACGTCCTAGAGGACAAGCCATGAATCCTAGCTGCAACTTGAGGTTTGAATCGTACCGATTTTATAATGACAGTAGAAGTATTGTTCCGGCGCCACCTGCATATCCGCCAACTCCCAAAGTTCATATTTCAGGAAATAAAGGAAAACATGTTGGAAGCGAAGGAGCCACATTAGAGTCATTACAATTCAATCTGGCAACAATTGAAGCGGCAACAGACAAGTTCTCGATTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGTGTTCTTCCCGATGGTAGCAAAATAGCTGTGAAGAGATTGTCAAAAAATTCTAGCCAGGGCTCATTAGAATTCAAGAATGAGGTTCTACTAATTGCCAAACTTCAACACACAAACCTGGTGGCTTTGTTAGGATTTTGCCTGAAAGATAAAGAGAAAATACTTGTTTATGAATATGTTCCCAACAAGAGCCTCGATTACTTTTTATTTGGTTCACAAAAGCCAAGAGAGTTAAATTGGCATGAGCTTATAAAATTATAA 948 0.4156 MPVAAVYPAISICGDNTSPCGGGPSLSGVSDQIYSVANETLNDAVAEAATSRGTKKFAIKEANLSISELMYTLVQCVPDLSPQFCSHCLYAIIKLIPKENLVPHGRIQNPSCNLRFGVDRFYYKGNLPPSSSYTTQEFGRPRGQAMNPSCNLRFESYRFYNDSRSIVPAPPAYPPTPKVHISGNKGKHVGSEGATLESLQFNLATIEAATDKFSIENRIGKGGFGEVYMGVLPDGSKIAVKRLSKNSSQGSLEFKNEVLLIAKLQHTNLVALLGFCLKDKEKILVYEYVPNKSLDYFLFGSQKPRELNWHELIKL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0430 315 SUPERFAMILY Protein kinase-like (PK-like) 197 314 IPR011009 -
Alju04g0430 315 Gene3D - 27 121 IPR038408 -
Alju04g0430 315 Pfam Protein tyrosine and serine/threonine kinase 214 312 IPR001245 GO:0004672|GO:0006468
Alju04g0430 315 Pfam Salt stress response/antifungal 38 116 IPR002902 -
Alju04g0430 315 ProSiteProfiles Protein kinase domain profile. 213 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0430 315 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 179 288 - -
Alju04g0430 315 Gene3D Phosphorylase Kinase; domain 1 180 288 - -
Alju04g0430 315 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 188 311 - -
Alju04g0430 315 ProSiteProfiles Gnk2-homologous domain profile. 14 121 IPR002902 -
Alju04g0430 315 ProSitePatterns Protein kinases ATP-binding region signature. 219 241 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0430 Alju-ChrAlju04 4379249 4382913 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0430 38 315 Receptor kinase-like Gene Family AT4G23130 36.747 5.81e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0430 PK_Tyr_Ser-Thr 1.3e-15 CL0016