Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0426 ATGGTTTCATGTCCTACGAAACGCAGTTATTCATCATGCCTCCAACCAATACAATCGGTAGGGAGAATTAATAATTCAAGGGCAGATGCACAAGGTTATAAAGAATTAAATAAGACGTTGCATGATGCGGTGGTGGAGGCAGAGATATCAGGGCCTGCAGCTACCAAGAACTTTGCAACAAAAGAAGCAAACTTGACTAGTTTGGGATCGCTGTACATTCTTGTACAGTGCACGCCGGATCTGTCCCCGCAATTCTGTAGCAAGTGTCTATACGGCTTGATCAAATTTGTTCCAAGCAATGATACTGTTAGATACGGTGGAAAAATTCTGAATCCGAGCTGCAATTTGAGATTCCAATCATATCAATTTTATTATAAGGACCACCAACCTCCCAGTAATTTAATCTTTCAAGAGTCCGAAAGGCCAAGTCTTGCAGGCTGGAACTGCTCCACCACCAAAGCCAACGATACTGCCAACGATCCCTACCTAAACAACCTCGGAAGTCTCTTTGAAGATCTCTCCAAGTCATCCAACATCACCAACAACAATGGATTCTACAGCACCATGGTAGGAAACAAGTCCAACACCGTCTACGGCCTCTTCATGTGTCGGGGTGACGTGTCCCCTCAGCTCTGCAATGAATGTGTCAATGAGGGAATCGAGCAACTGAACTATACGTGTTCCTCTTCAAAGGAGGCTATCATTTGGTATGATATGTGCATGCTTCGCTATTCCAATCGCTCTTTCTTCTCTACCCTAGACACCCAACCTATATATACAGAACATGGTGCGGATATGCTTCAAAACGAAAAAGATGGCTTCAATCGGCTACTAGCGAATACATTGAATGATCTAGTGAAGGCGACATCGAACTCAACGCCGATAGGAGTAAAGAATTTTGCAACAATAAAAGAATTCAGCTCTTCAGAGTTTAAAACGTTGTATACTCTTGCACAATGTACTCCAAACCTCAACAGCCCAGATTGCCAAAAATGTCTGTGGGATGCTCAGCAACAAATCTCGTCATGTTGTCTTGGAAAAAAAGGAGGACAAGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATTATACCGATTTTATAATAATTACAATACAAGTGCTGTTTCGGTGCCTCCAGCTTATCCCTCAAATAATAGTGGTGTTTTAGTAATTACAGGAAAAAATAAAGACCACTCACGAACAATCATAATAGCGGTGTCCCTTAGTGCTGCCTCGATCGCGCTTTTTTGTTTAGGCGTTTATTTCTGGAAGAGAAAAAAGAGCCAGCTGAATTATGAGGCGATTCTGAAGAAAAATTTTGGAAGTGAAGGAGCCACATTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCGATTGAAAACAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCAACCTTCCCGATGGTAGAAAAATAGCTGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGCTTATTAGAATTCAAGAATGAGGTTCTCCTAATTGCCAAACTTCAACACAGAAACCTGGTCGCATTATTAGGCTTTTGCTTGAAAGATCAAGAGAAAATACTTGTTTATGAATTTGTTGCCAACAAGAGTCTCGATTACTTTTTATTTGGTTCACAAAAGCCAAAAGAGTTAAATTGGCCAGAGCGTTATAAAATTATAGAAGGAATTGCTCGAGGAATTCTTTACCTTCATGAACATTCACGCCTTAAAGTAATACATCGAGATCTCAAGCCTAGCAATATTTTGTTAGATGATGAGATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGGTTGGTATTAATGAAACTAAGGGAAGCACAGATAGAATTGTTGGAACATTGGGGTACATGTCTCCAGAATACATTAAGTTTGGACTATTTTCTGAGAAATCAGATGTTTTCAGCTTTGGAGTAATTGTTTTAGAAATTGTGAGTGGAAAGAATATAAATTCTTACGTTGAATCTCAAGAATCTCAATATGCTGGCGGACTCTTAAGTGATGCTTGGAAGCATTGGAGGGATGAAAAATTGATGGAGATATTGGATTCAAATATGACAGAAGCTGGGTCACACAGTGAAATAAGGAAATGCGTCCATCTCGGCTTGTTGTGTGTTCAAGGAAGTCCACAAGTTAGGCCTTCCATGAATAAAGTTGTGCAATATCTAAGTAATGATTCTATGCAATTGCCAGTTCCTCAAGAACCAGCATTCTTCTTGCACAGTCAAATGGAAGCAGCAGAAACCAGTAGAGCAATGGAGGTTCAACTTGCCAACCACAATCAACATTCCATCAATGAAATATCGGAGAGTGTATTATTTCCTCGCTAG 2376 0.4011 MVSCPTKRSYSSCLQPIQSVGRINNSRADAQGYKELNKTLHDAVVEAEISGPAATKNFATKEANLTSLGSLYILVQCTPDLSPQFCSKCLYGLIKFVPSNDTVRYGGKILNPSCNLRFQSYQFYYKDHQPPSNLIFQESERPSLAGWNCSTTKANDTANDPYLNNLGSLFEDLSKSSNITNNNGFYSTMVGNKSNTVYGLFMCRGDVSPQLCNECVNEGIEQLNYTCSSSKEAIIWYDMCMLRYSNRSFFSTLDTQPIYTEHGADMLQNEKDGFNRLLANTLNDLVKATSNSTPIGVKNFATIKEFSSSEFKTLYTLAQCTPNLNSPDCQKCLWDAQQQISSCCLGKKGGQVMNPSCNLRFELYRFYNNYNTSAVSVPPAYPSNNSGVLVITGKNKDHSRTIIIAVSLSAASIALFCLGVYFWKRKKSQLNYEAILKKNFGSEGATLESLQFNLATIEAATDKFSIENRIGKGGFGEVYMGNLPDGRKIAVKRLSENSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEFVANKSLDYFLFGSQKPKELNWPERYKIIEGIARGILYLHEHSRLKVIHRDLKPSNILLDDEMNPKISDFGMARMVGINETKGSTDRIVGTLGYMSPEYIKFGLFSEKSDVFSFGVIVLEIVSGKNINSYVESQESQYAGGLLSDAWKHWRDEKLMEILDSNMTEAGSHSEIRKCVHLGLLCVQGSPQVRPSMNKVVQYLSNDSMQLPVPQEPAFFLHSQMEAAETSRAMEVQLANHNQHSINEISESVLFPR 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0426 791 CDD STKc_IRAK 470 738 - -
Alju04g0426 791 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 142 249 - -
Alju04g0426 791 SUPERFAMILY Protein kinase-like (PK-like) 448 763 IPR011009 -
Alju04g0426 791 Gene3D Phosphorylase Kinase; domain 1 426 539 - -
Alju04g0426 791 ProSiteProfiles Gnk2-homologous domain profile. 18 123 IPR002902 -
Alju04g0426 791 SMART serkin_6 464 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0426 791 FunFam Cysteine-rich receptor-like protein kinase 25 257 366 - -
Alju04g0426 791 ProSiteProfiles Gnk2-homologous domain profile. 255 366 IPR002902 -
Alju04g0426 791 ProSiteProfiles Protein kinase domain profile. 464 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0426 791 Pfam Salt stress response/antifungal 270 364 IPR002902 -
Alju04g0426 791 Pfam Salt stress response/antifungal 149 246 IPR002902 -
Alju04g0426 791 Pfam Salt stress response/antifungal 30 121 IPR002902 -
Alju04g0426 791 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Alju04g0426 791 FunFam cysteine-rich receptor-like protein kinase 10 540 745 - -
Alju04g0426 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Alju04g0426 791 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 99 788 - -
Alju04g0426 791 Gene3D Transferase(Phosphotransferase) domain 1 540 747 - -
Alju04g0426 791 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 424 539 - -
Alju04g0426 791 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Alju04g0426 791 Gene3D - 261 366 IPR038408 -
Alju04g0426 791 Gene3D - 144 249 IPR038408 -
Alju04g0426 791 Gene3D - 18 123 IPR038408 -
Alju04g0426 791 Pfam Protein tyrosine and serine/threonine kinase 466 738 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0426 Alju-ChrAlju04 4166563 4171036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0426 159 791 Receptor kinase-like Gene Family AT4G05200 42.466 1.82e-172 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0426 PK_Tyr_Ser-Thr 4.2e-47 CL0016