Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0419 ATGCTACAAGTGTTCCTCCTGCAAATACTACTGCTTCTGCTTCCCAAGGTAAAGCTCTCAACTATACGCCTAAGGAAAAGGTGGAATCTCATCGGGGACGATTGTTGCAATCGTGGTTTCAATTTCAGTGACACTGCGATTGAAATCAGCCATGTGGATTCACTGCAATATGATTTCCTTACAATTGAAGCCGCCACGAACAACTTCTCTGAGGATAACATGATTGGTAAAGGTGGATTTGGAGTGGTTTACCAGGTATCAATCGACCAAACTCAAATTAATGTCAATTGCGTTCATGGAACAATTGGTTATATAGCTCCAGAACAACTTTACCATAACCTTGGAGAGTTTTCTGTTAAGTGTGATGTGTACAGCTTTGGTGTCCTTCTAATGGAGATTATAAGTGGAAAGAAGAATAGTTTTTTGTATCAAATAGAGGATGAGGAGGAATACATGCCGAGCTATGCATGGAGACTTTGGAAAGAGGGAGAGCCCTTGGAGTTGGTAGACCCCACAATAAGAGAATCTTGTAATCCAAATGAAGTAATGAGATGCATTCACATTGCTCTGCTGTGTGTTCAAGAACATCCAGCAAATAGACCTTCAATGTCATCTATAGTTATTATGCTTCATAGTTACTGTCTGGCGCTGCCATCCCCAGCGGACCCATTAAATTTCTTGAAGAAGTTAACAGAAGGAGGAGGAGAACTTTCTACCGCGAGCATGGAATCTGTACAGTGTGTTGCGAAAATTGTGAGTTTAAGAGCAAAACTGTGGGGGAATATCCACAGAACAGAGAGTGAAATAAAAGCAGGGGAGGGAAAAGGTAGAATCTCATTAGGGACGATTGTTGCAATTGTGGTTTCGATTTCTGTGGCTGTCCTGATATTAATATTTGGCATATGCTGCTTGTGTAAAGGAATATGGCACAAGTATGACTCTGAATCTGCAATTGACATCAGCAATGTGGATCCACTGCAATATGATTTCCGTACTATTAAAGCAGCCACGAACAACTTCTCTGCAGATAACAAGCTTGGTGATAGCGGATTTGGACATGTCTACAAGACTGAGATGGAGGAAACTTTGCTTGACTTTTTATTTTTTGAGGGTTATCTTGCTCCTGAATACTCCATGAATGAACCAATTTTTGTTAAAATTGGTGTGTACATTTTTGGCGTCCTTCTAATGGAATTCTTTCCATCAAATGGAGGGTGTTGGGCACCTGCTGAGCCATCAGATAGACCTTCCATGTCATCCATAGTTCTCATGCTTGAAAGTTACTCTCTAACTCTGCCAACCCCTTCACGGCCTGCATTTTTCGTCAAGAAGTTTAGAGAAGAAGAAGAAGAAGAAAAACTTTCCACCATGAGCATGGAGTCTGTATAG 1389 0.4111 MLQVFLLQILLLLLPKVKLSTIRLRKRWNLIGDDCCNRGFNFSDTAIEISHVDSLQYDFLTIEAATNNFSEDNMIGKGGFGVVYQVSIDQTQINVNCVHGTIGYIAPEQLYHNLGEFSVKCDVYSFGVLLMEIISGKKNSFLYQIEDEEEYMPSYAWRLWKEGEPLELVDPTIRESCNPNEVMRCIHIALLCVQEHPANRPSMSSIVIMLHSYCLALPSPADPLNFLKKLTEGGGELSTASMESVQCVAKIVSLRAKLWGNIHRTESEIKAGEGKGRISLGTIVAIVVSISVAVLILIFGICCLCKGIWHKYDSESAIDISNVDPLQYDFRTIKAATNNFSADNKLGDSGFGHVYKTEMEETLLDFLFFEGYLAPEYSMNEPIFVKIGVYIFGVLLMEFFPSNGGCWAPAEPSDRPSMSSIVLMLESYSLTLPTPSRPAFFVKKFREEEEEEKLSTMSMESV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0419 462 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 273 360 - -
Alju04g0419 462 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0419 462 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 85 215 - -
Alju04g0419 462 Gene3D Transferase(Phosphotransferase) domain 1 68 216 - -
Alju04g0419 462 SUPERFAMILY Protein kinase-like (PK-like) 48 89 IPR011009 -
Alju04g0419 462 Gene3D Phosphorylase Kinase; domain 1 307 364 - -
Alju04g0419 462 Pfam Protein tyrosine and serine/threonine kinase 75 208 IPR001245 GO:0004672|GO:0006468
Alju04g0419 462 SUPERFAMILY Protein kinase-like (PK-like) 345 426 IPR011009 -
Alju04g0419 462 SUPERFAMILY Protein kinase-like (PK-like) 95 224 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0419 Alju-ChrAlju04 3945654 3951586 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0419 45 85 Receptor kinase-like Gene Family AT4G11480 53.659 1.50e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0419 PK_Tyr_Ser-Thr 2.5e-10 CL0016