Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0416 ATGAAATATTCTCCCATACTCTCTCCATTGAAATACACAGCTAATCCATCCTTCACCCTTACCATGACGACGTCCATGGTCATGGCTCCCCACAAAATTTTCTTATTCTTCTTCTTTATCACCTCCCTCCATTTCCCTTCCACCCAAGCACAGAATTATCTTTATCACAATTGCTCTTCCAACAAAACCTTCGCTGCCAATAGTGCTTTTCAATCCGACCGGACCACACTCCTCTCTTCCTTAGCTTCCAACAACACAACCAACACCGAGTTCTACAACGCCACTGTTTCCAGTGGCGGCGACGCCGTCTACGGCCTCTTTATGTGCCGGGGTGACGTCAACCTCACCACGTGCCACCAATGCGTCGTTAATGCAACTCAACGATTACCTTCCGAGTGCAGAGCTTCGAAGGAGGCAATAGTCTGGTACGATGAGTGCTTGCTTCGCTATTCCAACCGCTCCTTCTTCTCCACCGTCGACACAAGGCCTAGACTCGGCCTCTTGAACACCGGAAATGTCTCAAACCCGGCAAGCTTCATGAGAACACTGTACGATACTATGAACAAGACGGCAGATGAGGCTGCTAAACCTGCTGTGGGGAAAAAGAAGTATGCAACCAGAACAGCTAATTTTTCAGCGTTTCAAACTGTGTATTGTCTAGCTCAGTGTACGCCCGACCTTTCGCCGTCAGATTGCAGAAGGTGCCTGAGTGGTACGATTGGGGACCTTGACTGGTGTTGTGATGGTAAGCAAGGAGGAAGAGTCCTATACCCAAGCTGTAATGTTCGCTATGAATTGTACCCTTTCTATCAATCGGAAGCTTCAGCACCAACTCCTACTCCTACTCCGGCAATTGTTCCTCCTACTGGTTCCCAAGATGATGCAGGAAAAAGTGGGATCTCATCGGGGACGATTGTTGCGATTGTGGTTCCAATTTCAGTGGCTGTTCTGATATTTATAGTTGGCATTTGTTGCTTGAGCAAGAGAATGAGGAAGAAGCATGACTCTGTTCCTGAAGGAAAATCTGCTAGTGAAATCAGCAGCGTGGATTCGCTGCAATATGATTTCAGTACAATAGAAGAAGCCACCAACAAGTTCTCTGAAGATAACAAGCTTGGTGAAGGCGGATTCGGAGTGGTTTACAAGGGGACCCTTGCAAATGGACAAGTAATTGCTGTGAAGAGACTCTCACAAGGCTCTGGACAAGGTGTACAAGAATTTAAGAATGAAGTAGAGGTGGTTGCCAAGTTACAACATAGAAATTTAGTGAGGCTTTTGGGTTTCTGTGTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTTCCTAATAAAAGTCTTGATTGCATTCTTTTTGACCTCGAAAAGCAAAGGCAACTAGATTGGATAAAGCGTTACAAGATTGTTAAAGGAATCGTTCGAGGCATTAAATATCTTCATGAAGATTCGAGGCTTAAAATTATACATCGTGATCTTAAAGCTAGCAATGTACTATTGGACAGTGATATGAATCCAAAAATCTCAGATTTTGGTATGGCAAGAATTTTTATGGTGGACCAAACTCAAGGAAATACCAGCCGAATTGTTGGAACATATGGTTATATGTCTCCCGAATATGCTATGCATGGGGAGTTTTCTGTTAAGTCTGATGTCTACAGCTTTGGCGTCCTTCTAATGGAGCTTATTAGTGGGAAGAAGAATAGTTCTTTCTACCAAATAGAAGGTGCTGCGGACCTGCTTAGCTATGCCTGGAAACTTTGGAAGGATGAAGAACCTTTGGAATTGTTGGACCCCACAATAAGAGAATCCTACTCACCAAATGAAGTAATGAGATGCATCCACATAGGTCTATTGTGTGTTCAAGAAGATCCAGCAGATAGGCCTTCAATGGCTTCCATAGTTCTGATGCTTGATAGTTGCTCTGTGACTCTGCCAGCACCTTTACAGCCTGCATTTTTTGTACAAAGTGGAACTGATCCAAACATGCCAAAGGACTTTCAATTTGGTCAATCCACGACCAAGTCAGCACCAATGTCAGTCAACGAAATGTCTGTCAGTGAAGTAATGCCTCGACAAAAGGAAAGGTTCTTTGACCTTGTTGCCTTGTTGCCATTATTGGCGTTTTTTCTTCCTCATAAGCTCTGGTGCATCGGCAGGCAAGTTTGGCGGAAGTGGCACTGA 2181 0.4429 MKYSPILSPLKYTANPSFTLTMTTSMVMAPHKIFLFFFFITSLHFPSTQAQNYLYHNCSSNKTFAANSAFQSDRTTLLSSLASNNTTNTEFYNATVSSGGDAVYGLFMCRGDVNLTTCHQCVVNATQRLPSECRASKEAIVWYDECLLRYSNRSFFSTVDTRPRLGLLNTGNVSNPASFMRTLYDTMNKTADEAAKPAVGKKKYATRTANFSAFQTVYCLAQCTPDLSPSDCRRCLSGTIGDLDWCCDGKQGGRVLYPSCNVRYELYPFYQSEASAPTPTPTPAIVPPTGSQDDAGKSGISSGTIVAIVVPISVAVLIFIVGICCLSKRMRKKHDSVPEGKSASEISSVDSLQYDFSTIEEATNKFSEDNKLGEGGFGVVYKGTLANGQVIAVKRLSQGSGQGVQEFKNEVEVVAKLQHRNLVRLLGFCVQGEEKILVYEYVPNKSLDCILFDLEKQRQLDWIKRYKIVKGIVRGIKYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMARIFMVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLMELISGKKNSSFYQIEGAADLLSYAWKLWKDEEPLELLDPTIRESYSPNEVMRCIHIGLLCVQEDPADRPSMASIVLMLDSCSVTLPAPLQPAFFVQSGTDPNMPKDFQFGQSTTKSAPMSVNEMSVSEVMPRQKERFFDLVALLPLLAFFLPHKLWCIGRQVWRKWH 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0416 726 Gene3D Transferase(Phosphotransferase) domain 1 442 644 - -
Alju04g0416 726 Pfam Protein tyrosine and serine/threonine kinase 369 635 IPR001245 GO:0004672|GO:0006468
Alju04g0416 726 Pfam Salt stress response/antifungal 172 267 IPR002902 -
Alju04g0416 726 Pfam Salt stress response/antifungal 58 152 IPR002902 -
Alju04g0416 726 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 45 687 - -
Alju04g0416 726 Gene3D - 50 155 IPR038408 -
Alju04g0416 726 Gene3D - 164 269 IPR038408 -
Alju04g0416 726 FunFam Cysteine-rich receptor-like protein kinase 10 328 441 - -
Alju04g0416 726 ProSiteProfiles Gnk2-homologous domain profile. 52 155 IPR002902 -
Alju04g0416 726 Gene3D Phosphorylase Kinase; domain 1 326 441 - -
Alju04g0416 726 SUPERFAMILY Protein kinase-like (PK-like) 352 657 IPR011009 -
Alju04g0416 726 CDD STKc_IRAK 372 638 - -
Alju04g0416 726 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Alju04g0416 726 FunFam cysteine-rich receptor-like protein kinase 10 442 644 - -
Alju04g0416 726 FunFam Cysteine-rich receptor-like protein kinase 25 163 269 - -
Alju04g0416 726 MobiDBLite consensus disorder prediction 275 297 - -
Alju04g0416 726 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 51 154 - -
Alju04g0416 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Alju04g0416 726 ProSiteProfiles Protein kinase domain profile. 366 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0416 726 ProSiteProfiles Gnk2-homologous domain profile. 161 269 IPR002902 -
Alju04g0416 726 SMART serkin_6 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0416 Alju-ChrAlju04 3907899 3912057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0416 33 691 Receptor kinase-like Gene Family AT4G05200 51.642 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0416 PK_Tyr_Ser-Thr 1.7e-49 CL0016