Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0414 ATGTGTATCCAAAGCGCCATTGGAGCTCTTCCAAATTGTTGTAGCAACAAGAGAGGGGCAACGGTTTTGCTTCCAGCATGTAACATTAGATATGAACTTTACCCATTTTACAATATAACCCTAACATCTTCTTCGCCACCAGTTCCTCATCGATCAGGAAAAAGTAACATTGCAATAATTGTTGCGATTACTGTGCCGATTGTTGTTTCTGTGACTCTTTTTGTTGCGGCTTGCTGTTTCCTGCGTAAGAGGGCAAGCAAGAACAAGAAGTATAATACGTTCACAAAGGATGACATTGGGAATGATCTTACAGACGAAGAGTCTCTGCAATTTGAATTGGCGACAATAGAAGCCGCCACAAAAAGGTTCTCAGATGAGAACAAGATTGGCCAAGGGGGATTTGGAGCAGTTTATAAGGGTATCCTCCCAAATGGACAGGAAATTGCTGTGAAGAGGTTGTCGGTAACCTCCTTGCAGGGTGCTTTGGAATTTAAGAATGAAGCTGCTCTTGTGGCCAAGCTTCAACACAGGAATTTAGTGAGGCTATTGGGATTTTGCTTGGAGGGGCAAGAAAAGATACTTGTTTATGAATACATCCCAAATAAAAGCCTTGATCACTTTCTATTCAATTCTGAAAAGAAAGCAATACTTGATTGGTCAAGGCGTTACAAGATCATAATGGGAATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCTCAACTTAGAATAATACATCGTGATCTCAAAGCAAGCAATGTTTTATTAGATGCCAACATGAACCCAAAAATTTCAGATTTTGGTATGGCAAGAATCTTTCATGGAGAACAAACTCAAGTAAACACAGGAAGAATAGTTGGAACCTTTGGTTATATGTCTCCAGAGTATGCAATGCGTGGGCAATTTTCCGTGAAATCAGATGTATTCAGCTTTGGTATCTTAGTTTTGGAGATTGTTACAGGCAAGAAGAACACTGACTTGTATCAATCAGATCAAGCAGATGACCTCTTAAGCTATGCTTGGACAAATTGGACAAAGAAAACACCTTTGGAGATGTTGGATCCAACACTGAGAGGAGAATCCTTCTGA 1089 0.3994 MCIQSAIGALPNCCSNKRGATVLLPACNIRYELYPFYNITLTSSSPPVPHRSGKSNIAIIVAITVPIVVSVTLFVAACCFLRKRASKNKKYNTFTKDDIGNDLTDEESLQFELATIEAATKRFSDENKIGQGGFGAVYKGILPNGQEIAVKRLSVTSLQGALEFKNEAALVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDHFLFNSEKKAILDWSRRYKIIMGIARGILYLHEDSQLRIIHRDLKASNVLLDANMNPKISDFGMARIFHGEQTQVNTGRIVGTFGYMSPEYAMRGQFSVKSDVFSFGILVLEIVTGKKNTDLYQSDQADDLLSYAWTNWTKKTPLEMLDPTLRGESF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0414 362 Gene3D Transferase(Phosphotransferase) domain 1 199 362 - -
Alju04g0414 362 CDD STKc_IRAK 129 360 - -
Alju04g0414 362 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Alju04g0414 362 SMART serkin_6 123 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0414 362 Pfam Protein tyrosine and serine/threonine kinase 126 326 IPR001245 GO:0004672|GO:0006468
Alju04g0414 362 Gene3D Phosphorylase Kinase; domain 1 82 198 - -
Alju04g0414 362 FunFam cysteine-rich receptor-like protein kinase 10 199 362 - -
Alju04g0414 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Alju04g0414 362 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 82 198 - -
Alju04g0414 362 ProSiteProfiles Gnk2-homologous domain profile. 1 36 IPR002902 -
Alju04g0414 362 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 358 - -
Alju04g0414 362 SUPERFAMILY Protein kinase-like (PK-like) 108 357 IPR011009 -
Alju04g0414 362 Gene3D - 1 36 IPR038408 -
Alju04g0414 362 ProSiteProfiles Protein kinase domain profile. 123 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0414 Alju-ChrAlju04 3898665 3900751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0414 2 359 Receptor kinase-like Gene Family AT4G05200 57.641 2.39e-154 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0414 PK_Tyr_Ser-Thr 3e-47 CL0016