Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0410 ATGTTTCTCTTCAAAATTTATCTTCTTCTTCTTCCCCTTTCTGCGTTTCTTTTCACATCCTTCTTGGCAACCCTAGCTCTCGCTGCTCCCGTTTACAATGGTCATTTCTGCAACCACAGGACCACTTACTCACCCAACTCCACATTTCAACGTAACATTAATGTACTCCTCTCTTCTCTCACCTCCAACGCCTCCCTTGACTCCTCTGGCTCCTACAACACCGTCATGGGCTTCGGCACCACCTACGCCGTCACCGGCTACTTCCTCTGCCGCGGCGATGTCACCGTCTCCACTTGTCACGATTGCGTCACCGCCGCCGCCAAAGATGTTATTTCCCTATGCCGTAACCAAACTGAGGCCGTCATCTGGTACGACGTCTGCACACTGCGTTTCACCAACAGGTTCTTCCGGTTTGGGAGCGTCATTCCTGGAATGAATTTGACGGATGAGAAGAGCGTATCTGGCACCGAATTTAGCCGATTCAATCAGTCGTTGTTCGGATTGTTGGATGATTTGGACACGCGAGCTGCGAATTCGGAGACGGATAAGAAGTTCGCAACAGGGGAAGTTAGGGTTACGAGCTCTGTAACTGTGTATGGGCTTGCGCAATGCTCGAAGGACTTGACTTCTGAACAATGTGAAACGTGTTTGCAGAATGCTATCGGAATTCTTCCGGCTTGCTGCGAGGGAAAGCAAGGCGCGAGAGTTCTGCTTTCGCCCTGTAATGTGAGATATGAGGTTTTCCCATTCTACGATTCACCCACTTCGTCACCTGGAAAGAAGAAATATGGATCAGGAATTATTGCAGTGATTGTTATCCTTGTTGTTGTTTTTGTACTCCTCTTATGTTTAGGCTGCTATTTCCTGCTGAGAAGATCAAGGAAGAGTCACAGGACTATTCTCAGAGAACATTTTGGAAATGAAAGTAAGGCTTTGGAGTCGTTTCAATTTAGTTTGTCTACAGTTGAAGCAGCTACAAACAAGTTTTCACACCGGAATAAGATAGGCAAGGGTGGATTTGGAGAAGTTTACAAGGGTGTTCTTCGAGATGGACGAGAAATAGCAGTTAAAAAACTTTCTAAAAGTTCAGGACAGGGTTCAATAGAATTCACAAATGAGATTTTACTCATAGCCAAGCTTCAACACAGGAATCTTGTGGCTTTGTTAGGATTTTGCTTGGAAGCAGAAGAGAAGATGCTTATCTATGAATATGTTCCCAACAAAAGCCTTGATTACTTTTTATTTGATTCTCAAAGGAGAAAACTATTGAATTGGGATCAGCGTTACAGAATCTTGGAAGGAATTGCACGAGGAATTCTTTATTTACATGAGTACTTAAGACTCAAAGTTATACACCGTGATCTTAAACCTAGTAACGTGTTGTTGGATAATAATATGAATCCAAAAATTTCAGATTTTGGTTTGGCAAAAATAGTTGCTATAGATGATGATCAAGGAAGAACAAGAAGAATAGTTGGAACATATGGCTACATGTCTCCTGAATATTCTATGCATGGACAATTTTCTGAAAAGTCTGATATATTCAGTTACGGAGTCATCGCTTTAGAGTTAATTAGTGCAAAAAGAAACGCCCGATCACATGATTCACATAATGCTGATGACCTTATTAGCCATGCTTGGAGGCAATGGAGGGATCAAACACCATTAGAAATACTGGACCCAGATATAAAAGAAGCTTGCCCGCATAATGAAGTCATGAAGTGCATTCAGATTGGTTTATTATGTGTCCAAGACAATCCAAATGATAGACCCACAATGGCAAACGTTGTTTCATATTTTAGTAGTCCTTCAGCCGAATTGCCTCTACCTCGGCAACCAGCATTTTTAAGGAACAATGTAGTAGCGGGGGAATCCAGTTCAGGTTCTAGATCTTTATACTCGGTAAATGATTTGTCTATCACTAATTCTTTCCCTCGGTGA 1941 0.4245 MFLFKIYLLLLPLSAFLFTSFLATLALAAPVYNGHFCNHRTTYSPNSTFQRNINVLLSSLTSNASLDSSGSYNTVMGFGTTYAVTGYFLCRGDVTVSTCHDCVTAAAKDVISLCRNQTEAVIWYDVCTLRFTNRFFRFGSVIPGMNLTDEKSVSGTEFSRFNQSLFGLLDDLDTRAANSETDKKFATGEVRVTSSVTVYGLAQCSKDLTSEQCETCLQNAIGILPACCEGKQGARVLLSPCNVRYEVFPFYDSPTSSPGKKKYGSGIIAVIVILVVVFVLLLCLGCYFLLRRSRKSHRTILREHFGNESKALESFQFSLSTVEAATNKFSHRNKIGKGGFGEVYKGVLRDGREIAVKKLSKSSGQGSIEFTNEILLIAKLQHRNLVALLGFCLEAEEKMLIYEYVPNKSLDYFLFDSQRRKLLNWDQRYRILEGIARGILYLHEYLRLKVIHRDLKPSNVLLDNNMNPKISDFGLAKIVAIDDDQGRTRRIVGTYGYMSPEYSMHGQFSEKSDIFSYGVIALELISAKRNARSHDSHNADDLISHAWRQWRDQTPLEILDPDIKEACPHNEVMKCIQIGLLCVQDNPNDRPTMANVVSYFSSPSAELPLPRQPAFLRNNVVAGESSSGSRSLYSVNDLSITNSFPR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0410 646 SUPERFAMILY Protein kinase-like (PK-like) 314 621 IPR011009 -
Alju04g0410 646 FunFam Cysteine-rich receptor-like protein kinase 10 144 250 - -
Alju04g0410 646 Pfam Protein kinase domain 331 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0410 646 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 136 - -
Alju04g0410 646 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 642 - -
Alju04g0410 646 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
Alju04g0410 646 FunFam cysteine-rich receptor-like protein kinase 10 405 607 - -
Alju04g0410 646 CDD STKc_IRAK 335 600 - -
Alju04g0410 646 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Alju04g0410 646 Gene3D - 146 250 IPR038408 -
Alju04g0410 646 Gene3D - 31 136 IPR038408 -
Alju04g0410 646 SMART serkin_6 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0410 646 Gene3D Transferase(Phosphotransferase) domain 1 405 607 - -
Alju04g0410 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Alju04g0410 646 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 290 404 - -
Alju04g0410 646 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Alju04g0410 646 Pfam Salt stress response/antifungal 156 246 IPR002902 -
Alju04g0410 646 Gene3D Phosphorylase Kinase; domain 1 291 404 - -
Alju04g0410 646 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Alju04g0410 646 ProSiteProfiles Protein kinase domain profile. 329 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0410 Alju-ChrAlju04 3869159 3872469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0410 13 646 Receptor kinase-like Gene Family AT4G05200 44.544 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0410 Pkinase 2.1e-49 CL0016