Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0382 ATGTCTCGCTCGCCGGCCGATGCTTTCGCCGCCGGTGACTTACTATGCGGCGAGGATGCCCATGAAGTGATCTCCGGCGAAAACCACCCGTCGTCGTCGTCGTCGTCGTACCTGCCGTCGTATTCACCGCCTTCCGACGACGCCACCATGGGCAGACTCATCGACGTCGAGGCACATCACATGCCCGACCCAGATTACTTACGGCGGTGCCGTTATCGTTTAATCGACGTAACCGCTCGCCAAGACTCCATCAACTGGATCCTGAAGGTTCACGCACATTACGAGTTTCGTCCGGTAACGGCGTTCCTCTCAGTCAACTACCTCGATCGTTTTCTTTCTTGCTCTCCACTTCCGGTAACCTCTTATGCGTCTCTTCTATCCAAGAAAATCGAGCGGCAAATTCAGTGGGAGTATCATCTGATATCAGTGGCATGCTTATCTTTAGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACTGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAATCCAAGACGATTCAAAGAATGGAGCTCTGTGTCATGACCAAGCTACGCTGGAGATTACGCTCCATAACACCTTTTGATTATCTCCATTACTTCATCTCTAAGTTCTCTTGCTCCTCCGAACCGCAATCCGAATCCATAACCCGGTTCATCTCGACTGCTTCCAATCTCATCCTCGGCACTACCCTTGTGATTGATTTCTTGGGTTTTACGCCGTCGACCTTAGCGGCGGCCGCCGTTCTCTGCTCAGCTGGCCCGGGCCAACTGCCACTGTCCTTTCATGATGGAGTAAACAAAGAAATGGTGCGAAGCTGTCACCAACTAATGGAGGATTTCATGGTGGACACGTGCTCCTTTGCTGACTATAAATCCCCTGGAGCCGAGCTGGAGCCGCCTTCGAGTCCAATAGGCGTGCTTGACGCCGCTAGTTCATGTGGCAGCTGCGAAACTCGCTCAGAGCAGCCAGCATCAACCAGCGAAGCCGAGCCGCCCAACAAGCGGGCTCGATCCCCTGATCCTAATGGGTCATAG 1047 0.5291 MSRSPADAFAAGDLLCGEDAHEVISGENHPSSSSSSYLPSYSPPSDDATMGRLIDVEAHHMPDPDYLRRCRYRLIDVTARQDSINWILKVHAHYEFRPVTAFLSVNYLDRFLSCSPLPVTSYASLLSKKIERQIQWEYHLISVACLSLAAKMEEPEVPLLLDLQLVDPRFVFESKTIQRMELCVMTKLRWRLRSITPFDYLHYFISKFSCSSEPQSESITRFISTASNLILGTTLVIDFLGFTPSTLAAAAVLCSAGPGQLPLSFHDGVNKEMVRSCHQLMEDFMVDTCSFADYKSPGAELEPPSSPIGVLDAASSCGSCETRSEQPASTSEAEPPNKRARSPDPNGS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0382 348 SMART cyclin_7 85 186 IPR013763 -
Alju04g0382 348 SUPERFAMILY Cyclin-like 47 192 IPR036915 -
Alju04g0382 348 Pfam Cyclin, N-terminal domain 53 192 IPR006671 -
Alju04g0382 348 PANTHER CYCLINS 53 285 IPR039361 -
Alju04g0382 348 MobiDBLite consensus disorder prediction 26 43 - -
Alju04g0382 348 FunFam D6-type cyclin 190 279 - -
Alju04g0382 348 Gene3D - 63 193 - -
Alju04g0382 348 CDD CYCLIN_AtCycD-like_rpt1 79 190 - -
Alju04g0382 348 MobiDBLite consensus disorder prediction 300 348 - -
Alju04g0382 348 MobiDBLite consensus disorder prediction 24 44 - -
Alju04g0382 348 CDD CYCLIN_AtCycD-like_rpt2 195 281 - -
Alju04g0382 348 Gene3D - 52 257 - -
Alju04g0382 348 MobiDBLite consensus disorder prediction 317 336 - -
Alju04g0382 348 FunFam D6-type cyclin 63 189 - -
Alju04g0382 348 Pfam Cyclin, C-terminal domain 195 285 IPR004367 -
Alju04g0382 348 SMART Cyclin_C_2 195 321 IPR004367 -
Alju04g0382 348 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Alju04g0382 348 SUPERFAMILY Cyclin-like 197 286 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0382 Alju-ChrAlju04 3300752 3302492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0382 13 288 Core Cell Cycle Gene Families AT1G70210 42.308 3.07e-66 211