Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0367 ATGGAGCCTAGTGAGATAATAATCTCTGAAGAATGGAGTTCCCTTAGTGGGTTTTACACTGCCCAAGAAGCTGAGTTCATGACCCAGTTTTATGAAAACTGTTCAGTCCCAGAGGATCTCTATGGAAATTCCAACTTGTTGGGATTTCAATCTTCTTCTTCTTCTGCATTTTGGCCTACACACTTCACTGATGATGACAGCTTCTATTTTCCTTCAAATGTTGCTCATGATCCTACTAATAACAACTTTGGTTCCATATCCATGTGTTGTGAAGTTCAAGTTTCTGAACCAGCACAAGAGGATGATGATAATAAAACCAGCAACCTGGAGAGAAAGAGATCAATGAGTTCATTTGAGGTACAGAAGAACAAGAGGAATGTTAAACCCAGCAGGAATAATCCAAATCCAAAGTGTTCCAAAAGCAACAAGGAAGAGGATAGAAGCAATAATGACGATGGCCTTAACTCAAGTAGCTTCTTCTCATCATCAGAAGATGACTCCATTATTGCTTCTTCTCAGGAAGTTGACACAAACCCTAAGAACAATACAGATCTTAAGCCAAATAGCAAATCAAGATCTGATAGAGGTCCTGCCACTGATGCACAGAGCCTCTATGCAAGGAGGAGGAGAATGAGAATAAATGAAAGGTTGAGAATCTTACAAAACCTTGTCCCTAATGGAACAAAGGTAGATATAAGCACTATGCTTGAGGAAGCTGTCCAATATGTGAAATTTTTACAGCTACAAATTAAGCTTCTGAGCTCTGATGATCTGTGGATATACGCTCCAATTGCTTTCAATGGATTGAATATTGGATTAGGCCTCAATATCACCCCAACCACGCAACCATGA 852 0.3967 MEPSEIIISEEWSSLSGFYTAQEAEFMTQFYENCSVPEDLYGNSNLLGFQSSSSSAFWPTHFTDDDSFYFPSNVAHDPTNNNFGSISMCCEVQVSEPAQEDDDNKTSNLERKRSMSSFEVQKNKRNVKPSRNNPNPKCSKSNKEEDRSNNDDGLNSSSFFSSSEDDSIIASSQEVDTNPKNNTDLKPNSKSRSDRGPATDAQSLYARRRRMRINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWIYAPIAFNGLNIGLGLNITPTTQP 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0367 283 CDD bHLH_AtIND_like 198 260 - -
Alju04g0367 283 Gene3D - 198 259 IPR036638 GO:0046983
Alju04g0367 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 261 IPR036638 GO:0046983
Alju04g0367 283 Pfam Helix-loop-helix DNA-binding domain 207 247 IPR011598 GO:0046983
Alju04g0367 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 246 IPR011598 GO:0046983
Alju04g0367 283 FunFam Basic helix-loop-helix transcription factor 198 255 - -
Alju04g0367 283 MobiDBLite consensus disorder prediction 98 119 - -
Alju04g0367 283 MobiDBLite consensus disorder prediction 120 137 - -
Alju04g0367 283 SMART finulus 203 252 IPR011598 GO:0046983
Alju04g0367 283 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 44 256 - -
Alju04g0367 283 MobiDBLite consensus disorder prediction 152 186 - -
Alju04g0367 283 MobiDBLite consensus disorder prediction 96 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0367 Alju-ChrAlju04 3188232 3190131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0367 119 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 58.974 1.18e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju04g0367 HLH 2.7e-08 No_clan