Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0344 ATGGAGAAGGCACTAAGAGCATACATGGAGGTTCTGAGGCTAGTGAGGCGTTTGCCCAAAGATACAAGACCTTATTACGCCAAGTACGCACGCGAGAACTTCGTCAATTACCGAGAAGTGGATTCTGCAGATTCAACTTCTCTTCAAGATCTCTTCAATCGCACCTATCATCATTCTTTGTGGGTTCTCGATAAGTATTCGGTGGACAAATCTGCTGCGGATAAGCTCAAGGATATCTGCTGCTCATGTGAGGTTGTTGGAAGGCAGGTGAATGGCGAGTCGGTGGTAACTGGTACCCGAATCCGGAAAAGGGAAAGAAAGGAGGGTGCGTTGCGTTGGAGGACTCAACCACGTTCCACAGTCCATAACAGATCCGCCCATATGGACGACGACCACCACGTCGACGATTTCCACCGGGACCACCTTCTGATCCCAGCTTCTTCTACTTTCTCTCACCTTCTTTTTGGCAATGACCATGTGGACCCCACTCTTCACTCTTCGTCTCTTTTCTCCATTGGGAATAATGACACCTCCCCCAAAATGCTCTGTTTCGAGGGCTATGTCCCAAACAATCAATCCAACCTCTTTGTTTCTGAAACCAACGCCGTTACTGTAGTTACCCCTCAGAAGTCTGTCATCACTTCCAGCGAATCCTCCTCTGCTTCTTCCTCCGGCAACCATAACTCTAACTCTAATAAAAAGCGAAGTGGGTCGGGCCAGCAACTGGCGGGCTGCTCGGAATCCGTCGTCACGGAGGCCGGCGGTTGTGGCCCGAAGTATTTGAAGAAGGCCAGAGCGGGAAACGCCGCTTCAACAAGACATGCAAAGAGGAAGGAGAAACTTGGGGAACGAATAGCAGCGTTACAACAACTGGTTTCTCCATTTGGGAAGACAGATACAGCTTCTGTGCTTCACGAGGCAATGGGATACATAAGGTTTCTCCATGATCAAGTTCAGGTCCTCTGCTCGCCTTATTTGCAGGCACCACCTCCTCCTTTACCTCATTCCCGCTACAATGCGGGGGGTGGAGAAGAAGAAGCCAAAGGAGAGTTGAGCAGCAGAGGACTGTGTCTGATCCCTGTGGAATCCACCCTACACGTGGCCAGCAGCAACGGTGCTGATTTCTGGTCACCGGCCATGGCCAATAATGTTTCCTCATCAACAAGACTCTGA 1173 0.5038 MEKALRAYMEVLRLVRRLPKDTRPYYAKYARENFVNYREVDSADSTSLQDLFNRTYHHSLWVLDKYSVDKSAADKLKDICCSCEVVGRQVNGESVVTGTRIRKRERKEGALRWRTQPRSTVHNRSAHMDDDHHVDDFHRDHLLIPASSTFSHLLFGNDHVDPTLHSSSLFSIGNNDTSPKMLCFEGYVPNNQSNLFVSETNAVTVVTPQKSVITSSESSSASSSGNHNSNSNKKRSGSGQQLAGCSESVVTEAGGCGPKYLKKARAGNAASTRHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQAPPPPLPHSRYNAGGGEEEAKGELSSRGLCLIPVESTLHVASSNGADFWSPAMANNVSSSTRL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0344 390 CDD bHLH_AtbHLH_like 276 321 IPR045239 -
Alju04g0344 390 PANTHER OS01G0342800 PROTEIN 1 81 - -
Alju04g0344 390 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 276 330 IPR036638 GO:0046983
Alju04g0344 390 SMART finulus 269 320 IPR011598 GO:0046983
Alju04g0344 390 Gene3D - 268 327 IPR036638 GO:0046983
Alju04g0344 390 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 314 IPR011598 GO:0046983
Alju04g0344 390 CDD Complex1_LYR_LYRM9 4 65 IPR045291 -
Alju04g0344 390 MobiDBLite consensus disorder prediction 214 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0344 Alju-ChrAlju04 2989570 2995433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0344 276 387 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 54.237 2.64e-34 122