Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0340 ATGGGAAGCGTTGAAGGAGAAAGAACAACAGTTGGATGGGCTGCAAGAGACCCTTCTGGGATTCTCTCTCCATACACCTTCAATCTCAGGAACACGGGGCCTGATGATGTGTATATTAAGGTTCACTACTGTGGAATCTGCCACTCCGATCTGCATCAGATTAAGAATGATCTTGGCATGTCCAATTATCCTATGGTTCCTGGGCATGAGGTGGTTGGAGAAGTGATCGAGGTGGGTTCCAATGTTATCAAGTTTAAGGTCGGAGAAGTGGTCGGAGCAGGACTCATCGTTGGCAGCTGCCGGAATTGCAGGGCATGCAAATCGGATATTGAGCAATATTGTGGCAAGAAGATCTGGAATTACAACGATGTCTACACCGATGGAAAACCCACTCAAGGTGGCTTTGCTGAAACCATGGTCGTCGATCAAAACTTCGTGGTGAAGATACCGGAGGGGATGTCGCCGGAACAAGTGGCGCCACTGTTATGCGCCGGCGTGACAGTGTACAGTCCACTGTCACACTTTGGACTGAGAGAGAGTAGTGGGCTAAGAGGAGGAATATTAGGGCTTGGAGGAGTGGGACACATGGGGGTGAAGATAGCGAAAGCGATGGGACACCATGTGACAGTGATAAGCTCGTCGGAGAAGAAGAAGCAGGAGGCTCTGGAGCATCTCGGAGCAGACGAGTATGTGGTTAGCTCAGATGAAAGTCAGATGCAGAAGATTGCTGATTCACTTGATTATATCATTGATACTGTGCCAGTGGGTCACCCTCTTGAGCCTTATCTTTCTCTGCTCAAAGTCGACGGCAAGTTGATCTTAATGGGTGTTATCAACACTCCTCTGCAATTCGTCAGCCCCATGGTCATGCTTGGGAGGAAGATGATAACGGGAAGCTTCATAGGGAGCATAAAGGAGACGGAAGAGATGTTAGAATTCTGGAAAGAGAAGGGTCTGAGTTCAATGATAGAGATGGTGAAGATGGATTACATAAACAAGGCATTTGAGAGGTTGGAGAAGAACGATGTGAGGTATAGGTTCGTGGTTGACGTTGCTGGCAGCAAACTTGATCAGTGA 1077 0.481 MGSVEGERTTVGWAARDPSGILSPYTFNLRNTGPDDVYIKVHYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVIEVGSNVIKFKVGEVVGAGLIVGSCRNCRACKSDIEQYCGKKIWNYNDVYTDGKPTQGGFAETMVVDQNFVVKIPEGMSPEQVAPLLCAGVTVYSPLSHFGLRESSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSEKKKQEALEHLGADEYVVSSDESQMQKIADSLDYIIDTVPVGHPLEPYLSLLKVDGKLILMGVINTPLQFVSPMVMLGRKMITGSFIGSIKETEEMLEFWKEKGLSSMIEMVKMDYINKAFERLEKNDVRYRFVVDVAGSKLDQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0340 358 CDD CAD1 11 350 IPR047109 GO:0016616
Alju04g0340 358 Pfam Zinc-binding dehydrogenase 192 313 IPR013149 -
Alju04g0340 358 Gene3D - 13 351 - -
Alju04g0340 358 FunFam Putative cinnamyl alcohol dehydrogenase 6 322 351 - -
Alju04g0340 358 PANTHER ALDEHYDE REDUCTASE 8 353 IPR047109 GO:0016616
Alju04g0340 358 SMART PKS_ER_names_mod 20 349 IPR020843 GO:0016491
Alju04g0340 358 FunFam Cinnamyl alcohol dehydrogenase 164 321 - -
Alju04g0340 358 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Alju04g0340 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Alju04g0340 358 SUPERFAMILY GroES-like 16 177 IPR011032 -
Alju04g0340 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 319 IPR036291 -
Alju04g0340 358 Gene3D - 164 321 - -
Alju04g0340 358 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0340 Alju-ChrAlju04 2932354 2934445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0340 1 356 Monolignol Biosynthesis Gene Families AT3G19450 78.711 0.0 538