Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0335 ATGATCGAAGCGACGAAAACAGATTCGGCGACAATGGAGGAGCAGCAGAGAGACGTGGATCGGGTCAAGGGACCATGGAGCCCCGAGGAGGATGAGTTGTTGCGCAAGCTCGTGCAACGCTACGGTCCTCGGAATTGGTCTACTATAAGCAAATCAATACCCGGTAGGTCCGGGAAGTCTTGTCGTCTACGGTGGTGCAACCAGCTCTCGCCGGACGTGGCGCACCGGTCCTTCACACCGGAGGAAGACGAGATCATCATCAAGGCCCACTCAAAGTTTGGCAACAAGTGGGCCACCATAGCGAGGCTCCTGAACGGCCGTACGGACAACGCGATCAAAAACCACTGGAACTCGACCTTGAAGCGCAAGTTCTCGTCGTTGGTCGCCGGCGAAGGCACCCCAAACGACGAGCCTCCGGAAAAGAAACCAGCCATTGCGGAAGGCGCTGTGCCGATACAGTCATTGCCGCCGGGCGGCCATTGTTACTGCCTAAGCAGTCCATCAGGATCTGATGTTAGTGATTCAGGTCTTCCTGTGGTTTCATCTTCAATGGCGATTTGTCCAGTAGCGAGAAAATGCCCGAGTCCAATCTTCAACTTAAACAAAGAGCCCTGCACTGATCTTAGTCTGTACACTCTGGGACCCGATTTGAAGGAGTCGCAGAAGATTCCGATTCCGAGTCCTCCTGGTTTTACGGCCAAGGTACAAACGCAGTCTGAGAAGTTGTCATCAATGGCTACGTTTGGGCCTGATTTACTGATGGTGATGAAGGAAATGATAAGGGAAGAAGTGAGAAATTACATGGAGGGACATAATGATAGATTGTGCTCCAATCCTGACGGTGTGAGTGCTGGAATTTCAAAGTTAAATTGTGCAGAGTGA 882 0.5193 MIEATKTDSATMEEQQRDVDRVKGPWSPEEDELLRKLVQRYGPRNWSTISKSIPGRSGKSCRLRWCNQLSPDVAHRSFTPEEDEIIIKAHSKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSLVAGEGTPNDEPPEKKPAIAEGAVPIQSLPPGGHCYCLSSPSGSDVSDSGLPVVSSSMAICPVARKCPSPIFNLNKEPCTDLSLYTLGPDLKESQKIPIPSPPGFTAKVQTQSEKLSSMATFGPDLLMVMKEMIREEVRNYMEGHNDRLCSNPDGVSAGISKLNCAE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0335 293 FunFam Transcription factor MYB44 77 123 - -
Alju04g0335 293 CDD SANT 77 120 IPR001005 -
Alju04g0335 293 Gene3D - 22 74 - -
Alju04g0335 293 PANTHER MYB PROTEIN-RELATED 23 184 - -
Alju04g0335 293 ProSiteProfiles Myb-like domain profile. 18 69 IPR001005 -
Alju04g0335 293 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Alju04g0335 293 MobiDBLite consensus disorder prediction 10 26 - -
Alju04g0335 293 FunFam MYB transcription factor 23 74 - -
Alju04g0335 293 Pfam Myb-like DNA-binding domain 77 119 IPR001005 -
Alju04g0335 293 Pfam Myb-like DNA-binding domain 23 69 IPR001005 -
Alju04g0335 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 73 IPR017930 -
Alju04g0335 293 MobiDBLite consensus disorder prediction 1 26 - -
Alju04g0335 293 SMART sant 74 122 IPR001005 -
Alju04g0335 293 SMART sant 22 71 IPR001005 -
Alju04g0335 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 124 IPR017930 -
Alju04g0335 293 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Alju04g0335 293 CDD SANT 25 67 IPR001005 -
Alju04g0335 293 Gene3D - 77 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0335 Alju-ChrAlju04 2904741 2905622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0335 16 268 MYB Transcription Factor Family AT2G23290 49.462 5.84e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju04g0335 Myb_DNA-binding 5.7e-18 CL0123