LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju04g0332	ATGATTGAACACCTCAGAGAGCTTGATCTTTCCAACAATTTGCTTAATGGATCAGTACCCAATTCCATATTCAACGCTTCTGAGCTTCGAGTTCTTTCTCTAGCCAGCAATGTCATCTCAGGTGAGCTATCTGAGTCCATTGGTGAGTTGAAAACTCTTCAACTTCTAAACCTATCAGATAATGCCTTTGGTGGGTCAGTCCCAAAAAGTCTCATTTCACTGAAAAATCTTACCTTTGTTTCTTTGAGGAGTAATTACTTTGCTGGTGAAGTCCCAAGTGGGTTTCACTCTGTTCAGATTTTAGATCTGTCTTCGAATTTACTTAATGGGTCTTTACCAGATGACTTTGGTGGGGATAGCTTGAACTACTTGAACCTCTCCTACAACAAAATTTCAGGAACAATCCCACCAGACTTTGCCAAGAAGATACCTGCAAACTCCACTATAGATCTCTCCTTCAACAATCTAACAGGTCCAATACCACAATCTCTGGCTTTGCTTAACCAGAAACCAGAGTCACTTTCTGGAAACTCTGATCTCTGTGGGAAGCCATTGAAAATCCTTTGTGCTATTCCATCATCTCTTTCAAACCCACCCAATTCAACCACTTCTTCATCAACACCAGCAATTGCAGCTATACCGAAAACAATTGACACCAACCCTAAAACAAACAGTTCAGGAACCCCCAATGCGTCTCAGAATAAGCCACGAAATAGCCTCAAACCATCCAGCATAGCCGGAATTGTCGTCGGCGACATTGCCGGAGTAGGCATCTTAGTTGCAATCATTCTCTTGGTCTACCAACAACGGAAGAAAAAAGATGATAAACCCACCGAAAATGTTATCAAGATTACATCGAAACAAGAAGACAAGGAAATTAGCAAAAAATCCATAATCCCCTGTTTCTGGTTAGCAACTGACGACAAGGAGACGTCAGAAGCAACGAGCTCTGACAGTGACCAAGAGATTAATAATAATAATAATACGAAGATTGAAATGACGACCCAAAACGAGAATCTCAGGAAAGAAGGGAGGCTTGTGACGGTGGACGGAGAAACGAGGCTGGAGCTAGAGACATTACTGACGTCATCGGCATATATTCTGGGAACAAGCAGAGGAAGCATAGTGTACAGAGCAGTGCTTGAAGATGGAAGAGCTTATGCTGTGAGGAGGATAGGAATTGGAGAGTGTGCATTGGAGATGATGAAGGATTTCGAGAATCAAGTGAAAACAATCGCTAAGATTCGTCATCCCAATTTGGTTAGGATTCGTGGATTCTGCTGGGGAATGGATGAGAAGCTTCTGATTTGTGACTATGTCCCCAACGGAAGCCTCGCCAACCTCTGTTACAGAAGAACAGGGTCATCGCCATTGAGCTTGGCGTTGGAGGCTAGGTTGAAGATAGTAAGAGGAATAGCACGAGGCATAGCTTTCATCCACGACAAGAAACATGTCCACGGCAGCATTAAACCCTCCAACATCCTCTTCAACTCCGACATGGAACCTGTCATCACCGACCTCGGCCTCGACCGCATCCTCTGCAACACCACCACCAACAACTTCAACCTCAGAGCCAACGGCTCATCTCGCCAATTAGCCAACCTTAACCAGCATGAACAACAACAACAAGACCACCACCTCCCTTCGTCTTCTTCTGGTGGGACCCACCCAATGCCATATCAAGCACCAGAGTGGTTCCAAAGCATCAAGCCAAACCCAAAGTGCGATGTGTATTCCTTTGGCATTGTCTTGCTTGAGCTTCTCAGTGGGAGGTCTGTCTCAGACTTGGACATAGGTCAGTGGCCTCAGTGTGATGACGTGGAGGAGGAGAGGATCAGGGTGATGAGGGTGGCTGACGTGGCAATAAGGTCTGAGATTGAAAATAGGGAACATGTTATATTGGGTTGCTTCAAGCTGGGGCTTGCTTGTGCTTCTCCTCTGCCACAAAAGAGACCCTCCATGAAAGAAGCTCTTCACATTCTTGACAAGTTGATTCGCAGCTAA	2004	0.4511	MIEHLRELDLSNNLLNGSVPNSIFNASELRVLSLASNVISGELSESIGELKTLQLLNLSDNAFGGSVPKSLISLKNLTFVSLRSNYFAGEVPSGFHSVQILDLSSNLLNGSLPDDFGGDSLNYLNLSYNKISGTIPPDFAKKIPANSTIDLSFNNLTGPIPQSLALLNQKPESLSGNSDLCGKPLKILCAIPSSLSNPPNSTTSSSTPAIAAIPKTIDTNPKTNSSGTPNASQNKPRNSLKPSSIAGIVVGDIAGVGILVAIILLVYQQRKKKDDKPTENVIKITSKQEDKEISKKSIIPCFWLATDDKETSEATSSDSDQEINNNNNTKIEMTTQNENLRKEGRLVTVDGETRLELETLLTSSAYILGTSRGSIVYRAVLEDGRAYAVRRIGIGECALEMMKDFENQVKTIAKIRHPNLVRIRGFCWGMDEKLLICDYVPNGSLANLCYRRTGSSPLSLALEARLKIVRGIARGIAFIHDKKHVHGSIKPSNILFNSDMEPVITDLGLDRILCNTTTNNFNLRANGSSRQLANLNQHEQQQQDHHLPSSSSGGTHPMPYQAPEWFQSIKPNPKCDVYSFGIVLLELLSGRSVSDLDIGQWPQCDDVEEERIRVMRVADVAIRSEIENREHVILGCFKLGLACASPLPQKRPSMKEALHILDKLIRS	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju04g0332	667	Gene3D	Ribonuclease Inhibitor	1	194	IPR032675	-
	Alju04g0332	667	MobiDBLite	consensus disorder prediction	536	557	-	-
	Alju04g0332	667	MobiDBLite	consensus disorder prediction	536	563	-	-
	Alju04g0332	667	Coils	Coil	323	343	-	-
	Alju04g0332	667	Pfam	Leucine Rich Repeat	4	23	IPR001611	GO:0005515
	Alju04g0332	667	MobiDBLite	consensus disorder prediction	215	240	-	-
	Alju04g0332	667	Gene3D	Transferase(Phosphotransferase) domain 1	440	667	-	-
	Alju04g0332	667	ProSiteProfiles	Protein kinase domain profile.	362	665	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju04g0332	667	FunFam	Leucine-rich repeat receptor-like protein kinase	97	191	-	-
	Alju04g0332	667	PANTHER	OS05G0588300 PROTEIN	3	116	-	-
	Alju04g0332	667	SUPERFAMILY	L domain-like	4	187	-	-
	Alju04g0332	667	FunFam	Inactive leucine-rich repeat receptor-like protein kinase	1	93	-	-
	Alju04g0332	667	Pfam	Protein kinase domain	368	659	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju04g0332	667	SUPERFAMILY	Protein kinase-like (PK-like)	367	661	IPR011009	-
	Alju04g0332	667	Gene3D	Phosphorylase Kinase; domain 1	319	439	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju04g0332	Alju-ChrAlju04	2884775	2887580	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju04g0332	5	664	Receptor kinase-like Gene Family	AT4G37250	49.483	0.0	599

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Alju04g0332		Pkinase	2.7e-29	CL0016