Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0315 ATGGCGAAGAGCTGCCGATATATATGCAGAGAATCAGCAAAATGTAATTGGGCAAAGCGTGCAACTCAATACGTTCAAGATGAAACTCATACATCTTCGATGGCAAAACCAAGGATGGCAACAACAAGGACAACTGAAACTCGCAGACCTTCGATGACTGACAGTGATGACGACTGTCCTCCACTGGTCACGACCTTCCACGGCGAGGGCGGTGATGAGATAAAGAACACAGAACTTGAACAATGGCCGAACCGCAGCAACCAATCGAGCAGGTGCAGTTTTTCTGCCGAAAGAAGACCGCCGTCGCCATCACTTACTGCAAAACCAATCGAGCAGCCGGAGATTCTCCGATTCAAGGCTTTCGAACCTATCCTCCTTTTGGGTAAACACCGTTTCGCCGGCGTCGACATGCGGATCCGCGTAAAAGGCGGTGGTCACACCTCTCAGATATATGCTATTCGCCAGAGTATAGCCAAAGCTCTCGTTGCTTTCTACGAGAAATACGTTGATGAACAGAGCAAGAAGAAGATCAAGGACATTTTGGTTGGCTTGATTTGGTTGAGGATTGGTTTGAAATACCCTTTAGCTATAAGTACAGTGATGGTAGATGGCAAGTGGGGCAAGCAGTATGGCTTTGTTGGTGGGCATGTAGATAATGGAGTGGGTTTGCTGTCCTTTTCTATTCAAGTCTCCAATTCCATCAATTCAGGGGTGGTTGGTTCATGGTTGGTGTCTGCCTTGAATATGGACGTTGTAGAGATTCTTTGTTTCTTTCTTTCATTGATGCCTAGCTATATCCAGAAAATATGCTATATTATAGACCAAGTGGAGCTTATCTCCGGCCACTATCTCCAGGCATTCTTGCATTAG 870 0.4621 MAKSCRYICRESAKCNWAKRATQYVQDETHTSSMAKPRMATTRTTETRRPSMTDSDDDCPPLVTTFHGEGGDEIKNTELEQWPNRSNQSSRCSFSAERRPPSPSLTAKPIEQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYEKYVDEQSKKKIKDILVGLIWLRIGLKYPLAISTVMVDGKWGKQYGFVGGHVDNGVGLLSFSIQVSNSINSGVVGSWLVSALNMDVVEILCFFLSLMPSYIQKICYIIDQVELISGHYLQAFLH 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0315 289 ProSitePatterns Ribosomal protein S9 signature. 143 161 IPR020574 GO:0003735|GO:0005840|GO:0006412
Alju04g0315 289 MobiDBLite consensus disorder prediction 81 107 - -
Alju04g0315 289 MobiDBLite consensus disorder prediction 81 100 - -
Alju04g0315 289 Gene3D - 105 186 IPR014721 -
Alju04g0315 289 PANTHER RIBOSOMAL PROTEIN S9 112 176 IPR000754 GO:0003735|GO:0005840|GO:0006412
Alju04g0315 289 Pfam Ribosomal protein S9/S16 114 178 IPR000754 GO:0003735|GO:0005840|GO:0006412
Alju04g0315 289 MobiDBLite consensus disorder prediction 28 60 - -
Alju04g0315 289 SUPERFAMILY Ribosomal protein S5 domain 2-like 110 175 IPR020568 -
Alju04g0315 289 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0315 Alju-ChrAlju04 2732129 2737580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0315 105 186 Cytoplasmic Ribosomal Protein Gene Family AT5G18380 80.952 5.96e-42 139