Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0313 ATGGCTGAAGAGAAAGAAGCTCAAAACCAGATGGGACCTTGGGAGACTCATCAGTCATGGGGTCTCTCGAATCCTGACGACAATAGATTACCAAACATGGATCCACCACCAATCATAGGAAGCTCTTCTAACAATAATGACCCTCTCATTGTTCATCACAACCAACAAGTCGTCGACGAAGCTGGAGTTACTGCTCAAGGTAATGATAAGACGACTCCGTTCGAGACAGGCCAAGGAGGAATAAGGAAGAGGACTACTACTACTGGTAAAACCGCCACCGGCGGAGGAGAAGGGAAAGATGGAAACGGAGCTGGTGGTGGTGAGGCCGCCGGCGCCTGCGATCATGATATGCACATATGGACAGAGAGAGAGAGGAGGAAGAAGATGAGAAACATGTTCGCCGAACTTCATTCGCTGCTTCCCCAACTTCCTGCTAAGGCTGACAAATCAAGCATTGTTGATGAAGCGGTGAGGTACATTAAAACCCTGGAGAACATTCTGGAGGATCTGGAAAAGAAAAAAAAGGAAAGGCTAAAACAAGCCCAGCAGCTACCAGCTGATGATAATTCAACCACCACCATTGTGTATGACCCTTGTTCTGTGACTAATATAAACTCTTATCAGGGAAGTCCCTCTGCAGTTTCAAGGGAGGTTTTCATGGCTGATCATGGTGGATCATCTTCCATTATTCACAATTCAATCACTAATAACAACAACAACTTGATGGCCTCCACCACAAACGCCTTTGTTAATACTATTGGAACTTCATCAACTTCTTCTTCACTGTCACTTCCTGGAGGAGTTTTGAATAATAACAAAGTAGGGTTTCAGACTTGGAGCTCTTCAAATGTTGTCGTCAACATCAGTGGTGACCAGGCTCAGTTCAATGTGTGCTCCCTCAAGAAGCTAGGTCTCTTCACCAACATCTGTACTGTGTTTGAGAAGTACAAGATCAAGGTTTTGTCTGCTCATGTTTCATCTGATGATCATCGATGCTTTTTCATGATTCATACACAGGCAAATGGAGGTTCAAATAGGTATAAAGAGGCATTGACAGCGGAGGAAACTTTCAGGCAAGCAGCTGCAGAAATGACAATCTGGCTATCTTAA 1110 0.4459 MAEEKEAQNQMGPWETHQSWGLSNPDDNRLPNMDPPPIIGSSSNNNDPLIVHHNQQVVDEAGVTAQGNDKTTPFETGQGGIRKRTTTTGKTATGGGEGKDGNGAGGGEAAGACDHDMHIWTERERRKKMRNMFAELHSLLPQLPAKADKSSIVDEAVRYIKTLENILEDLEKKKKERLKQAQQLPADDNSTTTIVYDPCSVTNINSYQGSPSAVSREVFMADHGGSSSIIHNSITNNNNNLMASTTNAFVNTIGTSSTSSSLSLPGGVLNNNKVGFQTWSSSNVVVNISGDQAQFNVCSLKKLGLFTNICTVFEKYKIKVLSAHVSSDDHRCFFMIHTQANGGSNRYKEALTAEETFRQAAAEMTIWLS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0313 369 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 113 163 IPR011598 GO:0046983
Alju04g0313 369 Pfam Helix-loop-helix DNA-binding domain 118 164 IPR011598 GO:0046983
Alju04g0313 369 CDD bHLH_AtbHLH_like 118 165 IPR045239 -
Alju04g0313 369 Coils Coil 153 183 - -
Alju04g0313 369 MobiDBLite consensus disorder prediction 66 93 - -
Alju04g0313 369 MobiDBLite consensus disorder prediction 66 109 - -
Alju04g0313 369 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 4 368 IPR044278 GO:0003700|GO:0006355|GO:0009960
Alju04g0313 369 MobiDBLite consensus disorder prediction 1 48 - -
Alju04g0313 369 MobiDBLite consensus disorder prediction 11 26 - -
Alju04g0313 369 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 184 IPR036638 GO:0046983
Alju04g0313 369 SMART finulus 121 169 IPR011598 GO:0046983
Alju04g0313 369 Gene3D - 114 186 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0313 Alju-ChrAlju04 2707158 2712109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0313 114 369 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 37.023 1.32e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju04g0313 HLH 4.6e-11 No_clan