Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0308 ATGTTCTGCGAGGTCGCGTTCTATTTTGGATTGCTGGCATTTCTGGGAATGCAGCTTCGTCTAACAATGGCAGATTGCCCTTTGGATTTTAATGGATCAAACTTTACACTAGCATCCTCTGCGTGCTCTTACCAGGTTGAAAGAGGGAAATGTTGCCGCTACATTAATGCCAACATTGCAGTTTCTGTTGCTCGTTTTGCAAATGTAACAAGAAGCCTTGGAGTCACCCCAAATGCTTCTGACCTCTGTCTCCAGACCATATCTCAGACCTTGCAACATTATGGAGTTCCACGAAACGCGACAATTTTCTGTGGTTTTGGCACAAAAATCTCAGTAAATTATGAGTGCGAGGGTCGAACTACTGTCGTGCAAATGCTGCAGTCTCCCCGCTTTGGGCAGGTTGTGGAAAATTGCAAAGTGCCACTTGCTGAGGAAAGTAAATGCAAGAAATGCTTAAATGCTGGCATTAATTTCATACATCATCTGATAGGCAATGAAGATAACATAACACTGAGTACATGCCGTGATGCCACCTTTGCAGCATTGGCAAGCCAAGTTGATGAAATGTCTACCATTGATATTGCAAGCTGTTTCTTTGGGGTTCAAGGGCTTCTCAAACCTCATGCTTCAGAGCCATCCCCATCTTTGCCAACTCCTGAAGCTTCTCCTGGTCCACTGGTTGCTGATAGCCCAAGTCAGTCACTGTTAGGTGTACCTCTCAAGGGAAAGCACCATTCATACCACTTGACAATAATTCCTGCTATTGGTATTTCCGTCACAGTTGTTGCTGCTGTCATGCTCTTGGTCTTGATTGTTCTAATTCGTCGAAAAAGAAGAGAACTAGAGGTGCCTGATAATTTTAGTAAAACCCCTTCAAAAGCTAAATCTTCTTGTGCAATGTGGAAATTTCAGGAAGGTCCATCATCTATGTTTCAAAAATTCAACTACAGGGAGATAAAGAAGGCAACAGAAGATTTCAGCACCATCATTGGGCAAGGGGGATTTGGAACAGTATATAGAGCTCATTTCAGTAATGATCTTGTGTTGGCAGTAAAGAGAATGAACAAAGTTTCAGAACAAGGGGAGGATGAATTTTGCAGAGAAATAGAGCTTCTTGCTCGGTTGCATCATCGGCATCTTGTTGCATTACGAGGTTTTTGTGTTAAAAATCATGAGAGGTTTCTGATGTATGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATACCCCTGGTAGAGCACCTCTAAGTTGGCGAACAAGAATCCAAATTGCTATTGATGTGGCTAATGCACTGGAGTATCTCCATTTATATTGTGATCCTCCTCTATGGCACAGAGACATAAAATCTAGCAACATTTTACTGGATGAGAATTTTGTTGCCAAGTTAGCCGATTTCGGTCTTGCACATGCTTCAAAAGATGGCTCCATATGCCTCGAAGCTGTAAACACCAACATCACAGGAACTCCAGGTTACATGGATCCTGAATATGTGGTTACTCATGAGCTGACTGAGAAAAGTGATATATACAGTTATGGAGTATTACTGCTAGAAATTGTGACAGGAAGACGAGCGATTCAAGATAATAAAAATTTGGTAGAATGGGCACAGCCATACATGGGACCAGATTCTGTAACGCGATCGATGGAGCTAGTGGATCCAAGTGTGAGGGAGTCTTTTGATTTGGATCAGCTCCAGACAGTAGTGTCCATAGTAGAATGGTGCACACAAAGAGAAGGCAGAACCAGGCCTTCAATAAAACAAGTCCTTAGGCTTCTGTACGAGACATCAGAACCTATGCACAGTGGGTTTCTTGAAGATGAAGAATGTGAGGGGAGTCAGCAGAGTGGCAGAAATAGCAGAGCTAAAATACTGAGAAATGAAGCATTGTTTCAGAGTGGAGATGGAAGATATCTTGCTTCTTCTTCAAGTACATCAAGGTCCTATTGCAGCAGAAGCTTCTTACTTGAGACTAGTTCCCCACAGTCTCCTTTGAATATATTATCCGTGGAAGACAAATATCATTAG 2031 0.4229 MFCEVAFYFGLLAFLGMQLRLTMADCPLDFNGSNFTLASSACSYQVERGKCCRYINANIAVSVARFANVTRSLGVTPNASDLCLQTISQTLQHYGVPRNATIFCGFGTKISVNYECEGRTTVVQMLQSPRFGQVVENCKVPLAEESKCKKCLNAGINFIHHLIGNEDNITLSTCRDATFAALASQVDEMSTIDIASCFFGVQGLLKPHASEPSPSLPTPEASPGPLVADSPSQSLLGVPLKGKHHSYHLTIIPAIGISVTVVAAVMLLVLIVLIRRKRRELEVPDNFSKTPSKAKSSCAMWKFQEGPSSMFQKFNYREIKKATEDFSTIIGQGGFGTVYRAHFSNDLVLAVKRMNKVSEQGEDEFCREIELLARLHHRHLVALRGFCVKNHERFLMYEYMENGSLKDHLHTPGRAPLSWRTRIQIAIDVANALEYLHLYCDPPLWHRDIKSSNILLDENFVAKLADFGLAHASKDGSICLEAVNTNITGTPGYMDPEYVVTHELTEKSDIYSYGVLLLEIVTGRRAIQDNKNLVEWAQPYMGPDSVTRSMELVDPSVRESFDLDQLQTVVSIVEWCTQREGRTRPSIKQVLRLLYETSEPMHSGFLEDEECEGSQQSGRNSRAKILRNEALFQSGDGRYLASSSSTSRSYCSRSFLLETSSPQSPLNILSVEDKYH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0308 676 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Alju04g0308 676 CDD STKc_IRAK 330 594 - -
Alju04g0308 676 Pfam Protein kinase domain 328 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0308 676 Gene3D Phosphorylase Kinase; domain 1 288 399 - -
Alju04g0308 676 SUPERFAMILY Protein kinase-like (PK-like) 308 597 IPR011009 -
Alju04g0308 676 FunFam Putative receptor-like protein kinase 400 602 - -
Alju04g0308 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Alju04g0308 676 FunFam Putative receptor-like protein kinase 292 399 - -
Alju04g0308 676 Pfam SPARK 24 168 IPR043891 -
Alju04g0308 676 ProSiteProfiles Protein kinase domain profile. 324 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0308 676 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Alju04g0308 676 PANTHER OS01G0750732 PROTEIN 167 618 - -
Alju04g0308 676 SMART serkin_6 324 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0308 Alju-ChrAlju04 2667238 2671431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0308 21 670 Receptor kinase-like Gene Family AT3G19300 61.644 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Alju04g0308 Pkinase 9.6e-50 CL0016