Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0270 ATGGGCTTGCTTCCTCCTCCACAACTGAGCTTGGATTTGAGACCTACTTTTGTTCCCAAGACGATCACTGATTTCCTCTACGAAGTTTCCACGATCGCCAATGCGTCCGATAAGCTCTCCAGGCTCGACGATTTCCTCAAGAGATTGGAAGAAGAAATGAGGAAGATCGATGCCTTTAGGCGTGAGCTTCCTCTCTGTATGCTCCTTTTGAACGATGCAATTTTAGTTCTGAAGGAGGAATCGGCAAAATTCAGGATACCTAATTCTCATCCAGTATTGGAAGAATTTATTCCCTTGAGGAAAGAATGCGATCAGAAGGAGGAAAATGAAACAGAAAAGGAATGCCGAGATAAGAAAAATTGGATGAGTTCTGTACAACTCTGGAACACTGATAATTATACCACCTGTGAACAAAAAGAACATTATAAATTAGAAAACAAGAAAAGCGAAGAACAGTCTGTGGCAGAGGATCCTTTCAAATCTTGTAGAAATAGAATTGGAAGGAGGGTTTTTATGCCTTTTCCAACATACTGTCCAGTTTCTGTGACAACTGTGGCTACCAAGGAAGAAAAGGAAGAGTCTGATGTTAATGAACTTTCCCTTGTGACTCCTGGAGTTAAAAATCTGAGGGAGGGCTCTGTTTCTAGCGGATCAAGAATATCATCTGGCAGGGCGGTTTCATCCCCTCCTTGCAGTGACCAACCAAGTTTACGTCCTGGACAGCAGCAGACTGCTAGGAAACAAAGAAGGTGTTGGTCACCAGAGCTGCATCGTCGATTTGTCAGTGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGGAAGTTGATGGCCTGACCAATGATGAAGTGAAAAGCCATTTACAAAAATACCGACTTCATACCCGAAGACTTCCAGCTTCCGCAGCTACACCTGGTAACCAGTCTGTTGTAGTTCTTGGGGGTTTATGGATGTCCCAAGATCAGTATAATGACTCCTCCAAGGGTAGCATTTCAGGGTCTGGCTCTCCTCAAGGTCCCCTCCAGTTAACTTCAGGGTCTGGAGGAGGAATGTCCCAAACTGAAGATGAGAGCTTGGAAGATGATGAGGATGATGAAAAATCCAGAGAGCGATAG 1140 0.4447 MGLLPPPQLSLDLRPTFVPKTITDFLYEVSTIANASDKLSRLDDFLKRLEEEMRKIDAFRRELPLCMLLLNDAILVLKEESAKFRIPNSHPVLEEFIPLRKECDQKEENETEKECRDKKNWMSSVQLWNTDNYTTCEQKEHYKLENKKSEEQSVAEDPFKSCRNRIGRRVFMPFPTYCPVSVTTVATKEEKEESDVNELSLVTPGVKNLREGSVSSGSRISSGRAVSSPPCSDQPSLRPGQQQTARKQRRCWSPELHRRFVSALQQLGGSQAATPKQIRELMEVDGLTNDEVKSHLQKYRLHTRRLPASAATPGNQSVVVLGGLWMSQDQYNDSSKGSISGSGSPQGPLQLTSGSGGGMSQTEDESLEDDEDDEKSRER 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0270 379 NCBIfam myb-like DNA-binding domain, SHAQKYF class 247 302 IPR006447 GO:0003677
Alju04g0270 379 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 376 IPR044787 GO:0003700|GO:0006355
Alju04g0270 379 MobiDBLite consensus disorder prediction 209 249 - -
Alju04g0270 379 SUPERFAMILY Homeodomain-like 244 305 IPR009057 -
Alju04g0270 379 Coils Coil 32 62 - -
Alju04g0270 379 FunFam Myb family transcription factor 246 304 - -
Alju04g0270 379 MobiDBLite consensus disorder prediction 329 362 - -
Alju04g0270 379 MobiDBLite consensus disorder prediction 329 379 - -
Alju04g0270 379 MobiDBLite consensus disorder prediction 208 251 - -
Alju04g0270 379 Pfam Myb-like DNA-binding domain 249 300 IPR001005 -
Alju04g0270 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 304 IPR017930 -
Alju04g0270 379 Gene3D - 246 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0270 Alju-ChrAlju04 2311236 2313367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0270 8 326 G2-like Transcription Factor Family AT2G03500 40.237 8.62e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju04g0270 Myb_DNA-binding 2.1e-06 CL0123