LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju04g0205	ATGGCTTCAAGTTCCGATTCCTCTCCTTCCCCTGAGTCATCTCCGTCGGATTCTCCTCCACCACCTCCACCGGATTCAAGTTCATCTGGCGATTCCTCTTCCCCTCCCCCACCACAATCCCCTCCGTCGCCGCCACAATCTCCTCCTCCGCCGCCGCCACCATCTAACAGCCAATCTCCTCCACCGCCATCCGACCAAGACAATGGTGGCGACAACAGTAACTCACCCCCTCCGCCTCCTCCGCCTCCACCTCCTAATAGCAACAATGGTGGAAATAATAACAAAGGGAGCCCTCCGCCTCCACCACCGCCATCAAATTCCAAAGGAGATTTTTCGCCTCCGCCGCCAGTGCACCGATTGTCTCCACCAGAAAAAAGTTCACATGGATCATCAAATAGTACATCACCGTCATCAGGTAGCAATGATGATGGATCTCAATTGAGCGTACCGGCTATTATTGGTTTGGCTGCAGGAGCTGGCTTGTTGCTGCTTGTGTTCGTCTGCATCTTCGTTGAATGCAGCAGAAGGAGGAAGAGATCTGAGGGTCCCATTGTTTACTACACCAACAAAAAATTTGATGATGATGACTATTACAAGCACGCGAAGAAGGGAAACAATTGGAACAATGGTGATCAATACGTTATGAATATTCCAGCACCACCAGGAGCTTGGGGCGCACCGCCAGCTCCATTCTCTGGAAACATGAATAGCGGTGAGATAAGCAGCGCAAGCTATTCAGGGCCGGTGGGTGCGCCTCTGCCTCCGCCACACCCTTTGGTGGCGATAGGGTTCAACAAGAGCACTTTCACGTTGGAAGAGCTAACAGCTGCAACAAATGGGTTCGCTGAAGCAAACCTACTGGGACAAGGTGGGTTCGGGTATGTGCATAAAGGGGTGCTGCCCAATGGGAAGGAAATAGCCGTGAAGAGTTTAAAGTCCACCGGAGGCCAAGGGGACAAAGAGTTTCAAGCGGAGGTCGATATCATTAGCCGAGTCCATCATCGCCATCTCGTTTCTCTGGTTGGCTATTGTATTCAAGATGGTCGTAGTCTTTTGGTCTATGAGTTTGTACCCAACAAAACTATGGAATACCATCTTCACGGAAAGGACCGACCTGTTATGGATTGGCCCACTAGGCTCAAAATTGCAATTGGATCGGCCAAGGGACTTGCTTACTTGCACGAGGATTGCCACCCTCGAATCATCCACCGCGACATAAAGGGCGCAAACATTCTAATCGAAAACAACTTTGAAGCCAAGGTGGCAGATTTTGGATTGGCAAAGTTTACACAAGACAACAACACCCATGTTTCCACCCGGGTAATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCTTCAAGTGGGAAATTAACTGAGAAGTCTGATGTGTTCTCATTCGGTATTATGCTTCTGGAGCTCATAACAGGACGACGTCCCGTTGACTCCACTGGAGATTATGAAGAGGACAGTTTAGTTGACTGGGCGAGACCTCTTTGCACGAAGGCGATGGAAAGTGGAAGCTTTGAAGGTCTGGCGGATCCACGACTAGGCAATAATTATGATATGCAGGAGATGGCCCGTATGGTGGCTTGTGCTGCTGCCAGCGTCAGGCACTCTGCAAGAAGGCGACCAAAAATGAGCCAAATAGTAAGGGCACTGGAGGGAGACGTGTCGCTAGATGATCTGAGCGAGGGGGTGAAGCCAGGGCAGAGTTCAATATTCACAAGCAACAATATGGGGTATGACGCAAGCAGTTACAGTGCAGACATGAAGAAGTTCAGGAAGCTAGCATTAGATAGCAGCTATGCCAGCAGTGAGTTTGGCCAAACCAGTGAGTATGGTCTCAACCCTTCCTCTTCAAGCAGCGACACTCACTCTTCTGAATACACCAAGACCCACTAA	1905	0.5008	MASSSDSSPSPESSPSDSPPPPPPDSSSSGDSSSPPPPQSPPSPPQSPPPPPPPSNSQSPPPPSDQDNGGDNSNSPPPPPPPPPPNSNNGGNNNKGSPPPPPPPSNSKGDFSPPPPVHRLSPPEKSSHGSSNSTSPSSGSNDDGSQLSVPAIIGLAAGAGLLLLVFVCIFVECSRRRKRSEGPIVYYTNKKFDDDDYYKHAKKGNNWNNGDQYVMNIPAPPGAWGAPPAPFSGNMNSGEISSASYSGPVGAPLPPPHPLVAIGFNKSTFTLEELTAATNGFAEANLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDKEFQAEVDIISRVHHRHLVSLVGYCIQDGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILIENNFEAKVADFGLAKFTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGRRPVDSTGDYEEDSLVDWARPLCTKAMESGSFEGLADPRLGNNYDMQEMARMVACAAASVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSSIFTSNNMGYDASSYSADMKKFRKLALDSSYASSEFGQTSEYGLNPSSSSSDTHSSEYTKTH	634

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju04g0205	634	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	401	413	IPR008271	GO:0004672\|GO:0006468
	Alju04g0205	634	MobiDBLite	consensus disorder prediction	607	628	-	-
	Alju04g0205	634	MobiDBLite	consensus disorder prediction	95	121	-	-
	Alju04g0205	634	MobiDBLite	consensus disorder prediction	13	61	-	-
	Alju04g0205	634	SUPERFAMILY	Protein kinase-like (PK-like)	259	554	IPR011009	-
	Alju04g0205	634	ProSiteProfiles	Protein kinase domain profile.	281	560	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju04g0205	634	Pfam	Protein tyrosine and serine/threonine kinase	285	492	IPR001245	GO:0004672\|GO:0006468
	Alju04g0205	634	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	159	602	IPR047117	-
	Alju04g0205	634	ProSitePatterns	Protein kinases ATP-binding region signature.	287	309	IPR017441	GO:0005524
	Alju04g0205	634	MobiDBLite	consensus disorder prediction	1	144	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju04g0205	Alju-ChrAlju04	1703153	1707153	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju04g0205	120	632	Trihelix Transcription Factor Family	AT1G70460	48.190	1.40e-154	460

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Alju04g0205		PK_Tyr_Ser-Thr	3.9e-45	CL0016

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