Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0205 ATGGCTTCAAGTTCCGATTCCTCTCCTTCCCCTGAGTCATCTCCGTCGGATTCTCCTCCACCACCTCCACCGGATTCAAGTTCATCTGGCGATTCCTCTTCCCCTCCCCCACCACAATCCCCTCCGTCGCCGCCACAATCTCCTCCTCCGCCGCCGCCACCATCTAACAGCCAATCTCCTCCACCGCCATCCGACCAAGACAATGGTGGCGACAACAGTAACTCACCCCCTCCGCCTCCTCCGCCTCCACCTCCTAATAGCAACAATGGTGGAAATAATAACAAAGGGAGCCCTCCGCCTCCACCACCGCCATCAAATTCCAAAGGAGATTTTTCGCCTCCGCCGCCAGTGCACCGATTGTCTCCACCAGAAAAAAGTTCACATGGATCATCAAATAGTACATCACCGTCATCAGGTAGCAATGATGATGGATCTCAATTGAGCGTACCGGCTATTATTGGTTTGGCTGCAGGAGCTGGCTTGTTGCTGCTTGTGTTCGTCTGCATCTTCGTTGAATGCAGCAGAAGGAGGAAGAGATCTGAGGGTCCCATTGTTTACTACACCAACAAAAAATTTGATGATGATGACTATTACAAGCACGCGAAGAAGGGAAACAATTGGAACAATGGTGATCAATACGTTATGAATATTCCAGCACCACCAGGAGCTTGGGGCGCACCGCCAGCTCCATTCTCTGGAAACATGAATAGCGGTGAGATAAGCAGCGCAAGCTATTCAGGGCCGGTGGGTGCGCCTCTGCCTCCGCCACACCCTTTGGTGGCGATAGGGTTCAACAAGAGCACTTTCACGTTGGAAGAGCTAACAGCTGCAACAAATGGGTTCGCTGAAGCAAACCTACTGGGACAAGGTGGGTTCGGGTATGTGCATAAAGGGGTGCTGCCCAATGGGAAGGAAATAGCCGTGAAGAGTTTAAAGTCCACCGGAGGCCAAGGGGACAAAGAGTTTCAAGCGGAGGTCGATATCATTAGCCGAGTCCATCATCGCCATCTCGTTTCTCTGGTTGGCTATTGTATTCAAGATGGTCGTAGTCTTTTGGTCTATGAGTTTGTACCCAACAAAACTATGGAATACCATCTTCACGGAAAGGACCGACCTGTTATGGATTGGCCCACTAGGCTCAAAATTGCAATTGGATCGGCCAAGGGACTTGCTTACTTGCACGAGGATTGCCACCCTCGAATCATCCACCGCGACATAAAGGGCGCAAACATTCTAATCGAAAACAACTTTGAAGCCAAGGTGGCAGATTTTGGATTGGCAAAGTTTACACAAGACAACAACACCCATGTTTCCACCCGGGTAATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCTTCAAGTGGGAAATTAACTGAGAAGTCTGATGTGTTCTCATTCGGTATTATGCTTCTGGAGCTCATAACAGGACGACGTCCCGTTGACTCCACTGGAGATTATGAAGAGGACAGTTTAGTTGACTGGGCGAGACCTCTTTGCACGAAGGCGATGGAAAGTGGAAGCTTTGAAGGTCTGGCGGATCCACGACTAGGCAATAATTATGATATGCAGGAGATGGCCCGTATGGTGGCTTGTGCTGCTGCCAGCGTCAGGCACTCTGCAAGAAGGCGACCAAAAATGAGCCAAATAGTAAGGGCACTGGAGGGAGACGTGTCGCTAGATGATCTGAGCGAGGGGGTGAAGCCAGGGCAGAGTTCAATATTCACAAGCAACAATATGGGGTATGACGCAAGCAGTTACAGTGCAGACATGAAGAAGTTCAGGAAGCTAGCATTAGATAGCAGCTATGCCAGCAGTGAGTTTGGCCAAACCAGTGAGTATGGTCTCAACCCTTCCTCTTCAAGCAGCGACACTCACTCTTCTGAATACACCAAGACCCACTAA 1905 0.5008 MASSSDSSPSPESSPSDSPPPPPPDSSSSGDSSSPPPPQSPPSPPQSPPPPPPPSNSQSPPPPSDQDNGGDNSNSPPPPPPPPPPNSNNGGNNNKGSPPPPPPPSNSKGDFSPPPPVHRLSPPEKSSHGSSNSTSPSSGSNDDGSQLSVPAIIGLAAGAGLLLLVFVCIFVECSRRRKRSEGPIVYYTNKKFDDDDYYKHAKKGNNWNNGDQYVMNIPAPPGAWGAPPAPFSGNMNSGEISSASYSGPVGAPLPPPHPLVAIGFNKSTFTLEELTAATNGFAEANLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDKEFQAEVDIISRVHHRHLVSLVGYCIQDGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILIENNFEAKVADFGLAKFTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGRRPVDSTGDYEEDSLVDWARPLCTKAMESGSFEGLADPRLGNNYDMQEMARMVACAAASVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSSIFTSNNMGYDASSYSADMKKFRKLALDSSYASSEFGQTSEYGLNPSSSSSDTHSSEYTKTH 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0205 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Alju04g0205 634 MobiDBLite consensus disorder prediction 607 628 - -
Alju04g0205 634 MobiDBLite consensus disorder prediction 95 121 - -
Alju04g0205 634 MobiDBLite consensus disorder prediction 13 61 - -
Alju04g0205 634 SUPERFAMILY Protein kinase-like (PK-like) 259 554 IPR011009 -
Alju04g0205 634 ProSiteProfiles Protein kinase domain profile. 281 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0205 634 Pfam Protein tyrosine and serine/threonine kinase 285 492 IPR001245 GO:0004672|GO:0006468
Alju04g0205 634 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 159 602 IPR047117 -
Alju04g0205 634 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Alju04g0205 634 MobiDBLite consensus disorder prediction 1 144 - -
Alju04g0205 634 Gene3D Phosphorylase Kinase; domain 1 258 356 - -
Alju04g0205 634 SMART serkin_6 281 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0205 634 MobiDBLite consensus disorder prediction 607 634 - -
Alju04g0205 634 MobiDBLite consensus disorder prediction 124 144 - -
Alju04g0205 634 FunFam proline-rich receptor-like protein kinase PERK1 259 356 - -
Alju04g0205 634 MobiDBLite consensus disorder prediction 73 88 - -
Alju04g0205 634 Gene3D Transferase(Phosphotransferase) domain 1 357 565 - -
Alju04g0205 634 FunFam Proline-rich receptor-like protein kinase PERK1 357 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0205 Alju-ChrAlju04 1703153 1707153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0205 120 632 Trihelix Transcription Factor Family AT1G70460 48.190 1.40e-154 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju04g0205 PK_Tyr_Ser-Thr 3.9e-45 CL0016