Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0193 ATGGAAATGCTTTCATGTCAAAAATACCAGTTTCGCTCTCCATCCTCTTTCATTCTTCAATCCCTCTCCACCCCAACTTCCACCATTGTCAACTGCCAAAATCCACACGGCCCAGATACCCACAACCTCATTCTCCGCAAGCAGAACTCCAAATCCACCTCCTTCCTCCTTCACCAACTATCTCTCGACCAAGAAAACCATCTTTCCCAGCAATTCAATCTCAAATCCAGTGACCTTCGACACGACATGCCCGATGAAGAGAAGATTAAGCTTCTAGAGCTTTCCCTTGTAAGGAAAAGAACCCCTCAGTTTCCTGGGTCCATCTATGTTCAATCTCCTAGTGATCCCGACGTGGGTTCTTCTTTGCCGCCTCTGCTAACTCTGTTTAGAGAAAAAATTGAAGATGATGGAGCGGACCAGGAGGAGATAATAATGCGCGCGATTGAGATTCGAAGGACGGTGACGCGAGAGATTTTGTTGGAAGCGATGAGGAAGGGCAAGTTTGGAATCACGTACGCTACCAATTTGGTCAATCGATTGACTGGTTTTATCGATTATGTCATGATTGAAGCTGCTTCGATGAAAAGAATACCTCAGTATTCGCATTCTACGTTCAATTTACGCGCCAAAACTGTCATAGACGACTTACAAGTTGTGCCTCTTATCAGATGGTTGAAGCATAATGCACTGTCATATCATCGGATATCAAAGCTCATTTTGATGTCAAGAGGAAACCTCGAGTCTATAAGACGTCTAGCTGAGTGGTTGAGATCATTACACGTGAAGGGAGAATATCTCGGGGTTACACTTGTGAATGCTGGAGATAATATTCTGGAACGCAGTAATGACGAACTGGATGGGATTGTTGAGTATTTAGGGAGCAAGGGAGTCAGGAGGGATTGGATGGGTTATGTCATAAGCCGATGCCCTCAATTGTTATCTTACAGCTTGGAAGAAGTGAAGACTCGCGTGAAATTCTACCTAGATATGGGTTTAAATGATCATGATTTTGGCACAATGGCTTTTGATTATCCTAAAGTTCTTGGTTACTTTACTCTAGAAGAAATGAATCAAAAGGTCAATTACTTAAAGGAGTTTGGGATCAAAACTGAGGATGTGGGCAGATTGCTAGCATTTAAGCCACATTTGATGGGATGTAGCATTGAAGAAGGATGGAAGCCTCTTGCTAAATATTTGTATTATTATGGGGTTACCCGAGATGGTATGAGGAGAATGCTTATGATCAAACCAATGGTCTTTTGTATTGAATTGCAGACAACTATTGTGCCTAAGATAAAGTTTTTTCAGGATCTAGGGATTCGAGATGATGCAATTGGAAACATGCTTGTGAAGTTTCCTACTCTGCTCACATACAGCCTATACAAGAAGATTAGGCCAGTGGTCATATTCTTGATGACCAAAGGTGGGGTCAGCGATGAAGATATTGCAAAGACTATTGCTATGGGACCAGAGCTCTTGGGATGCAGCATAACACATAAGCTTGAAGTGAATGTAAAATATTATCTGTCACTCGGCATCCGTCGTAAGCAATTGGGTGAGATGATTGCGGATTTCCCAATGCTGCTCAGGTACAACATAGACATCCTTCGTCCCAAGTATAGTTATTTGCGGCGAACCATGGTCCGGCCTTTGGATGATCTCATTGAGTTTCCAAGGTTTTTCAGTTATTCTCTCAACAGTCGAATCATTCCAAGGCACAAGGTTCTGGTGGAAAATCGGATTAATTTGAAGCTGCGATACATGTTAGCTTGTTCTGATGAAGAATTCAGGAAATTGGTTGACTCTCAAATTAGAAAGCGACAAACATTGCTATCTGCAGGCATGAGCGCTGATGTTGTTACAGACCCTCGCACATGA 1878 0.426 MEMLSCQKYQFRSPSSFILQSLSTPTSTIVNCQNPHGPDTHNLILRKQNSKSTSFLLHQLSLDQENHLSQQFNLKSSDLRHDMPDEEKIKLLELSLVRKRTPQFPGSIYVQSPSDPDVGSSLPPLLTLFREKIEDDGADQEEIIMRAIEIRRTVTREILLEAMRKGKFGITYATNLVNRLTGFIDYVMIEAASMKRIPQYSHSTFNLRAKTVIDDLQVVPLIRWLKHNALSYHRISKLILMSRGNLESIRRLAEWLRSLHVKGEYLGVTLVNAGDNILERSNDELDGIVEYLGSKGVRRDWMGYVISRCPQLLSYSLEEVKTRVKFYLDMGLNDHDFGTMAFDYPKVLGYFTLEEMNQKVNYLKEFGIKTEDVGRLLAFKPHLMGCSIEEGWKPLAKYLYYYGVTRDGMRRMLMIKPMVFCIELQTTIVPKIKFFQDLGIRDDAIGNMLVKFPTLLTYSLYKKIRPVVIFLMTKGGVSDEDIAKTIAMGPELLGCSITHKLEVNVKYYLSLGIRRKQLGEMIADFPMLLRYNIDILRPKYSYLRRTMVRPLDDLIEFPRFFSYSLNSRIIPRHKVLVENRINLKLRYMLACSDEEFRKLVDSQIRKRQTLLSAGMSADVVTDPRT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0193 625 Pfam mTERF 289 596 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 Pfam mTERF 275 423 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 374 405 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 303 333 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 551 582 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 519 549 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 483 514 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 446 477 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 338 369 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 SMART mt_12 410 441 IPR003690 GO:0003690|GO:0006355
Alju04g0193 625 Gene3D Transcription termination factor 3, mitochondrial 378 603 IPR038538 -
Alju04g0193 625 PANTHER CGI-12 PROTEIN-RELATED 281 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0193 Alju-ChrAlju04 1629671 1637761 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju04g0193 mTERF 6.9e-65 No_clan