Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0192 ATGGTGGATCATCGGCGAAACTTAGTGTCTCTTGGGCTCTTGTTCTTCTTGCTTTTTCAGTTCACATTTGAACAGCTTGAGCCTCTGAGTTCACCCGCAGAGCGACTCGCTCTACTTCAACTTCGATCTTCCTTGGGCTTGAGATGCAGGGAATGGCCAATAAAAGCCGACCCTTGCTTAATCTGGAATGGCGTAAGCTGTGAGAATGGCAGAGTCACTGGGATCAATATTTCTGGGTTTAGAAGAACAAGACTTGGGAGGCAAAACCCACAATTCTCTATTGATGCTTTAGCCAATTTGACCTTCCTGCAATCATTCAATGCGTCCAAGTTTCTTCTTCCTGGTCCTATTCCTCACTGGTTTGGCCAAAAGCTTTCTTCACTCAAAGTGCTTGATCTTCGTTCTTGCTCCATCATTGGTGCAATTCCTTCTACTCTTGGGAATCTAACAAGCCTAACCACTCTCTATTTATCTGATAATAACCTCACTGGGATCATTCCTGATAGTCTTAGTCAACTTTCAGCCATTTCTGCTCTTGATCTTTCCCGGAATTTTCTCTCAGGATCCTTGCCCACATCCTTTGTCTTTCTTGGGAATCTTTCTTTCCTTGACATTTCTTCCAACTATTTATCCGGGTCGATTCCCCAAGTCATTGGGTCACTTTCTAAATTACAATACTTAAATCTTTCAAACAATAGTCTAACTTCTTCTATACCTGCTCAACTTGGGGATCTTAGTAACCTAGTTGACCTTGATCTAAGTGATAATTCCTTGTACGGTCTGGTGCCTCCGGATTTAATGGGGTTAAGGAGCTTGCAGAGAATGAAGCTCGGGAACAACATTCTTGAAGGACCTTTGCCAGAGAACTCGTTTCATACTACGTCGCCGTTGCAGTTCATAGAGCTGAGACAAAATAATTTTACGGGGGCCTTGCCTGATGAGTTGTGGTATCTTCCAAGATTGAGCTTTGTGGATGTCTCCAGTAATTACTTCACTGGTGTGCTTCCTAGTTCTAGTTCCACTGCTAATGCTACTAATACAGTTAAGGGAAATATTTCTCATAATCTATTTTATGGAAGCCTCACTCCTCTGCTCAAAAGGTTCAGTTTCATTGATCTGTCAAGCAATTATTTTGAGGGCAAGGTTCTGGATTTCGCAGTTAATGCATCACTGGTCGGCAACTGCCTCCAAGATGTATCAAATCAGAGGATAACAGAAGAATGTGACTCATTCTATTCCCTGAGGGGGCTCTCTGTTCATAATTTTGGGCAAGCAAACATGACCAGACCTCGTGCTGCAGAAAGCTCTGGGAATAACAATAGAAGAAAAATTATACTAGCAGGAATTTTGGGTGGAGTTGGTTTGATTGCAGTTTTGGTGTTCCTGCCGGCGTTGTTGCTTCTGTGTACTCATAAGCGGAGTAAATCAAATAATGCAGGAATTGGTGTGGGTGCTGCTCTTGCTAGTGGCAGTCCTGCACCTGCTGATGCATTGATAGAATTATCAAAAGTAGGACACTCATTTTCTTACCAGCAATTGCTGAAGGCTACAGGTGATTTCAGTGATGCAAATCTTATGAAACACGGTCACACGGGTGATCTCTTCAATGGTGTTTTGGAAAGTGGGATATCTGTAGTGATAAAAAGGATTCATTTGCATTCATCTAAAAATGAGAATTCTTACATTTCAGAATTGGACCTTTTCAGTAAAGTTTCTCATACTAGATTGGTTCCCCTGTTGGGTCATTGCTTAGAAAATGACAATGCGAAGTTCCTGGTTTATAAACATATGCCAAACGGGGACTTGTTGAATTGCTTGCACAACCGACAAACTATATATGAAGATGGTACGTTGCAGTCTTTGGATTGGATAACAAGATTGAAAATTTCTATTGGAACTGCGGAGGCCCTATGTTATCTGCATCATGAATGCAATCCACCATTTGTTCACAGAGATATTCAAGCAAGCAGTATACTTCTAGATGATAAATATGAAGTTCGGCTAGGGAGTCTAAGTGAAGCCTGCACTCAGGAAGGGGATACTCATCAAAGGAGAATCTCAAGGTTGCTTCGGTTACCCCAGTCGTCAGATCAAGGCTCATCTGGTTCATCACCAGCAGTTTGTGCCTATGATGTATATTGCTTTGGGAAAGTATTGCTTGAGATGATAACTGGAAAGCAAGGAATTGGTGCATCTGGTGATGCACAAGAATGGTTGGAACTGACATTACCTTACGTTAGTGTATATGACAAGGATCTTGTAACTAAGATTGTGGATCCATCCATGGTTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCAGTGGCGATCATAGCGAGGTCTTGCCTGAACCCTAAACCTTCAAGAAGACCCCAGATGAGATATGTCCTCAAGGCTCTTGAAAACCCTCTAAAAGTCATAAGGGAAGAGAGTTACAGTAGTTCTGCAAGGCTAAGAACAACTTCTTCCAGAGGCTCTTGGAATGCTGCTTTATTTGCTAGTTGGCGTCAGAATTCTGATGTAACAGTGGTTCCAGCATCTTCTTCTGGTGCATTAAGAGCTGAAGAAGGCGGCGGCGATCTTTCTTGGTCCCGCCGGCGTTATTTGACTGAGATAGTTCCAGAACCATCTAGCAGCATTCAAGAGGCAGAGAAGCAGGACTAG 2664 0.4268 MVDHRRNLVSLGLLFFLLFQFTFEQLEPLSSPAERLALLQLRSSLGLRCREWPIKADPCLIWNGVSCENGRVTGINISGFRRTRLGRQNPQFSIDALANLTFLQSFNASKFLLPGPIPHWFGQKLSSLKVLDLRSCSIIGAIPSTLGNLTSLTTLYLSDNNLTGIIPDSLSQLSAISALDLSRNFLSGSLPTSFVFLGNLSFLDISSNYLSGSIPQVIGSLSKLQYLNLSNNSLTSSIPAQLGDLSNLVDLDLSDNSLYGLVPPDLMGLRSLQRMKLGNNILEGPLPENSFHTTSPLQFIELRQNNFTGALPDELWYLPRLSFVDVSSNYFTGVLPSSSSTANATNTVKGNISHNLFYGSLTPLLKRFSFIDLSSNYFEGKVLDFAVNASLVGNCLQDVSNQRITEECDSFYSLRGLSVHNFGQANMTRPRAAESSGNNNRRKIILAGILGGVGLIAVLVFLPALLLLCTHKRSKSNNAGIGVGAALASGSPAPADALIELSKVGHSFSYQQLLKATGDFSDANLMKHGHTGDLFNGVLESGISVVIKRIHLHSSKNENSYISELDLFSKVSHTRLVPLLGHCLENDNAKFLVYKHMPNGDLLNCLHNRQTIYEDGTLQSLDWITRLKISIGTAEALCYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEACTQEGDTHQRRISRLLRLPQSSDQGSSGSSPAVCAYDVYCFGKVLLEMITGKQGIGASGDAQEWLELTLPYVSVYDKDLVTKIVDPSMVVDEDFLEEVWAVAIIARSCLNPKPSRRPQMRYVLKALENPLKVIREESYSSSARLRTTSSRGSWNAALFASWRQNSDVTVVPASSSGALRAEEGGGDLSWSRRRYLTEIVPEPSSSIQEAEKQD 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0192 887 SUPERFAMILY Protein kinase-like (PK-like) 501 800 IPR011009 -
Alju04g0192 887 FunFam Predicted protein 490 596 - -
Alju04g0192 887 FunFam Putative LRR receptor-like serine/threonine-protein kinase 597 821 - -
Alju04g0192 887 Gene3D Transferase(Phosphotransferase) domain 1 597 821 - -
Alju04g0192 887 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 446 826 - -
Alju04g0192 887 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Alju04g0192 887 Pfam Leucine rich repeat 223 280 IPR001611 GO:0005515
Alju04g0192 887 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
Alju04g0192 887 SUPERFAMILY L domain-like 62 336 - -
Alju04g0192 887 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 289 - -
Alju04g0192 887 ProSiteProfiles Protein kinase domain profile. 520 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0192 887 SMART LRR_typ_2 221 245 IPR003591 -
Alju04g0192 887 SMART LRR_typ_2 197 220 IPR003591 -
Alju04g0192 887 SMART LRR_typ_2 269 293 IPR003591 -
Alju04g0192 887 SMART LRR_typ_2 149 172 IPR003591 -
Alju04g0192 887 Gene3D Phosphorylase Kinase; domain 1 493 596 - -
Alju04g0192 887 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 31 190 - -
Alju04g0192 887 Gene3D Ribonuclease Inhibitor 194 441 IPR032675 -
Alju04g0192 887 ProSiteProfiles Leucine-rich repeat profile. 151 172 IPR001611 GO:0005515
Alju04g0192 887 ProSiteProfiles Leucine-rich repeat profile. 223 246 IPR001611 GO:0005515
Alju04g0192 887 Pfam Protein tyrosine and serine/threonine kinase 527 799 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0192 Alju-ChrAlju04 1625431 1628790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0192 33 694 Miscellaneous Gene Families AT2G16250 55.988 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Alju04g0192 PK_Tyr_Ser-Thr 3.8e-22 CL0016