Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0191 ATGGCGTCCGCAGATGTTGAATACAGGTGCTTTGTCGGGGGGCTCGCATGGGCCACCGACAGCGAGGCCCTTGAGAAGGCCTTTTCTCCGTTTGGCGAGATCATCGAATCGAAGGTTATTAATGATCGTGAGACTGGTAGGTCAAGAGGGTTCGGATTCGTAACCTTCTCGTCTGAGCAGGCCATGAGAGATGCTATCGAGGGGATGAACGGTCAGGATCTTGATGGCCGTAATATTACTGTGAACGAGGCCCAATCCCGTGGCCGAGGTGGCGGCGGAGGCGGTGGATACGGCGGCGGTGGCGGCGGATATGGTGGTGGTGGTGGTGGATATAGCCGTGGTGGAGGAGGATACGGAGGTGGAGGCCGCCGTGAAGGTGGATACAACCGTAACGGTGGTGGAGGCTACTCTGGTGGCGGCGGTGGCGGCTACGGTGGCGGTTATGGTGGTGGACGTGAACGCGGGTATGGTGACGGTGGATCTCGCTACTCCAGAGGCGGTGGTGCCACTGATGGTAACTGGAGAAACTAG 531 0.5895 MASADVEYRCFVGGLAWATDSEALEKAFSPFGEIIESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGGYGGGGGGYGGGGGGYSRGGGGYGGGGRREGGYNRNGGGGYSGGGGGGYGGGYGGGRERGYGDGGSRYSRGGGATDGNWRN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0191 176 PANTHER GEO13361P1-RELATED 3 161 - -
Alju04g0191 176 FunFam Glycine-rich RNA-binding protein GRP1A 2 110 - -
Alju04g0191 176 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Alju04g0191 176 SUPERFAMILY RNA-binding domain, RBD 8 96 IPR035979 GO:0003676
Alju04g0191 176 MobiDBLite consensus disorder prediction 81 104 - -
Alju04g0191 176 SMART rrm1_1 9 82 IPR000504 GO:0003723
Alju04g0191 176 CDD RRM2_NsCP33_like 9 84 - -
Alju04g0191 176 Gene3D - 2 119 IPR012677 -
Alju04g0191 176 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Alju04g0191 176 MobiDBLite consensus disorder prediction 120 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0191 Alju-ChrAlju04 1605899 1606705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0191 10 81 Eukaryotic Initiation Factors Gene Family AT2G23350 41.667 5.18e-11 58.5