Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0189 ATGGCATCTTCATCATCATCATCAAGTTGTGTGAGGAGAGAGAAGAATGATACAGAGAGGTGTTTTTGGACAGAGAAACAGAACAAGGTGTTTGAGAAGGCACTGGCAAAGTACGAGGAAGATACACCAGAAAGGTGGGACAAAGTGGCAAGAGAAGTTGGAGGAGGCAAAACTGCACAACAGGTTCAAAGACATTATCAGATTCTGTTGCGTGATCTCTCATACATTGAATCTGGACTTGTTCCTATTCCTAATTATAAATCTTCATCACCCTCCTCCGTGCTTGATCACCAGGACAGGTATTTTTCTCTTCTGCAACTCAATTTCTGTTTTTTTTTTTTCTAG 345 0.4087 MASSSSSSSCVRREKNDTERCFWTEKQNKVFEKALAKYEEDTPERWDKVAREVGGGKTAQQVQRHYQILLRDLSYIESGLVPIPNYKSSSPSSVLDHQDRYFSLLQLNFCFFFF 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0189 114 Gene3D - 15 83 - -
Alju04g0189 114 CDD SANT 23 70 IPR001005 -
Alju04g0189 114 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
Alju04g0189 114 SMART sant 19 72 IPR001005 -
Alju04g0189 114 Pfam Myb-like DNA-binding domain 23 67 IPR001005 -
Alju04g0189 114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 74 IPR017930 -
Alju04g0189 114 FunFam Transcription factor SRM1 15 83 - -
Alju04g0189 114 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 93 IPR044636 GO:0003700
Alju04g0189 114 ProSiteProfiles Myb-like domain profile. 15 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0189 Alju-ChrAlju04 1587685 1588029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju04g0189 Myb_DNA-binding 2.9e-07 CL0123