Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0187 ATGTTGCGCTGTCTCAACACCTCCGGCAACTTCACCGGAAACTGCCCCGACGTGACAGTGTTGGAAAGGCAAAGGATGAGGATGAAATGGCAACAAGAACAACAATATCACCAAAACCAGAGCTTTTATGATGATTCTGCTCTCGGTGAAGTCGTCGCTAAGTCCATCAAGCCTGAAATGGGTCAACCTAACTTCCCCAGTTTTGGGTTTGGGTCTCCTGGGTTTGAATCAAGTTCTGCAATTTCAATGACTTCCATGGCAGCAGCTGAAGAAACCAGAAACAGAGACTCTGTTTCAGAGAAGGAAAAAATGAGCTCTGCAAGTGGGAAACAGAACTTGAAGAAGAGAAAATCCGATAAGCTTCATAGCTCCAAGGTTGTTGCAGAAAGTGAAAACAAAGAGAAGAAGATGAAAGGAAATGGAGAGGAAGGAGAATCCAAAATAACAGAGCAAAACAGCAGCAAAGAAACATGTGGAGGTACCTCAAAGGAAAATTCGAAGGTGTCCGAGGTTCAAAAGACAGATTACATCCATGTCCGAGCGCGTCGTGGCCAAGCCACTGATAGCCATAGCCTAGCAGAAAGAGTTAGAAGGGAAAAGATCAGTGAGAGAATGAAGTATTTGCAGGATTTAGTACCAGGTTGTAACAAGATCACAGGAAAAGCTGGAATGCTTGATGAGATCATCAACTATGTTCAATCTCTTCAACGCCAAGTAGAGTTCTTGTCAATGAAATTAGCTACTGTAAACCCAGCACTTGACTTCAACCTGGATGATCTCTTCTCCAAAGAGGTTTTTAGTACTTGTGGTCCAAGTTTTGCAACATTTGGGATGGGATCAGACATGAATAATCCGGCATATCTTCAGTTCAATAATAACTCAGGCCAACAGTTACCTCCTTCAATCCCAGAAACTTTTCTTGACTCCTGCTGTTTCCCTTAA 942 0.431 MLRCLNTSGNFTGNCPDVTVLERQRMRMKWQQEQQYHQNQSFYDDSALGEVVAKSIKPEMGQPNFPSFGFGSPGFESSSAISMTSMAAAEETRNRDSVSEKEKMSSASGKQNLKKRKSDKLHSSKVVAESENKEKKMKGNGEEGESKITEQNSSKETCGGTSKENSKVSEVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPALDFNLDDLFSKEVFSTCGPSFATFGMGSDMNNPAYLQFNNNSGQQLPPSIPETFLDSCCFP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0187 313 MobiDBLite consensus disorder prediction 93 114 - -
Alju04g0187 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 235 IPR011598 GO:0046983
Alju04g0187 313 FunFam Basic helix-loop-helix transcription factor 182 254 - -
Alju04g0187 313 Pfam Helix-loop-helix DNA-binding domain 189 236 IPR011598 GO:0046983
Alju04g0187 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 253 IPR036638 GO:0046983
Alju04g0187 313 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 85 281 IPR024097 GO:0006355
Alju04g0187 313 MobiDBLite consensus disorder prediction 83 170 - -
Alju04g0187 313 Gene3D - 182 254 IPR036638 GO:0046983
Alju04g0187 313 MobiDBLite consensus disorder prediction 122 150 - -
Alju04g0187 313 SMART finulus 191 241 IPR011598 GO:0046983
Alju04g0187 313 MobiDBLite consensus disorder prediction 151 167 - -
Alju04g0187 313 CDD bHLH_AtBPE_like 175 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0187 Alju-ChrAlju04 1569867 1571310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0187 9 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 46.082 1.06e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju04g0187 HLH 1.6e-06 No_clan